| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Mpop_4493 |
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| Symbol | |
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| ID | 6309551 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Methylobacterium populi BJ001 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_010725 |
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| Strand | + |
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| Start bp | 4785448 |
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| End bp | 4787949 |
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| Gene Length | 2502 bp |
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| Protein Length | 833 aa |
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| Translation table | 11 |
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| GC content | 72% |
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| IMG OID | 642653174 |
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| Product | diguanylate cyclase/phosphodiesterase with PAS/PAC sensor(s) |
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| Protein accession | YP_001927127 |
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| Protein GI | 188583682 |
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| COG category | [T] Signal transduction mechanisms |
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| COG ID | [COG5001] Predicted signal transduction protein containing a membrane domain, an EAL and a GGDEF domain |
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| TIGRFAM ID | [TIGR00229] PAS domain S-box
[TIGR00254] diguanylate cyclase (GGDEF) domain |
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Plasmid Coverage information |
| Num covering plasmid clones | 5 |
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| Plasmid unclonability p-value | 1 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | 32 |
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| Fosmid unclonability p-value | 1 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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Sequence |
| Gene sequence | ATGCTCAACA TCGTCGCCTG CGTCACGAAC CAGCACGATC CCGGCCTCGT CGCCGTCTCC
GCGGGCATCT GTCTGCTCGG TTGCTTCTCC ACCGTGACCC TGATGGCCGA GGCCGCAGGC
GCCGAGCGGC GAGCCCTCGT CCCCTGGCTG ATCGCGGCGG CGGCGGTGTT CGGCTGCAGC
GTCTGGTCGC TGCACTTCGT TGCGATGCTG GCCTTCCGGC CCAGCGCCCA GGCAGCCTAC
GGGCTTCTGC CCACCGCGGC CTCGATCGGC ATCGCGGTGA CGGGGGCGCT GATCGCGCTC
CTGATCTGGT GCCGGGCGGA TCACCACCCG CTCAAGCTGG CCGCGGCCGG CATGGTGATG
GCGGCGGCGA TCGCGGGGAT GCACTATGCG GGCGTGGGCG CGATGGCGGC CAACAGCCTG
CTCCTGTTCG ACGGCGCCTA CGTCCACGCC TCGCTCGGGC TCTGCGCGAT CCTTGCGGTG
ACCGCCCTCG CCCGGGCCGG CGACCTCACC GGGCTCGGCC GACGCATCGA GGTCAGCCTG
TGGCTGGCGC TGGCGATCTG CGGGCTGCAC TTCACCGGCA TGACGGCGCT GACCGTCGCG
CCCGCGGCGC CCCTGGAGGA GGGCGGTGCC GTCCTCGGTT CGACGCAGCT CGGCCTCGCG
GTGGGGCTCG TGAGCCTCGT CGTCCTCGCC GCCGGGCTCG CCGCGCTGCT GATGCAGCGG
CATCTCATGC GCCGCCGCAT GGACGAGTTG AGCCGCATGC GCCTGCTCGG CAACCTCGCC
CACGAGGTGC TGCTCATCCA CCGCGACGGA CGGGTGGTCG AGATCAACCA AGCGGGCCTG
CGCCTGTTCG AGACCACGCT TCAGGAGATC GTCGGCCGGC CGTTGCTCGA CCTGTTCGCC
GATGCCGACG CTCCGGCCCT GCTGCGGCGC AGCCGCTGCC GGCCGGAGGA GCTGCGGCCG
GAGGAGTTCG AGATCCGCAC GGCTGCGGGC CTCGCCGTGC CGGTGGAACT CTCATGCCGC
GCCATCGAGT ATCTCGGCCG CCCGGCCACC GCGGTGGCCC TGCGCGATCT CAGCCAGCGC
CGCCGCGACG AGGCGCGCAT CCGCCACCTC GCCCTGCACG ACGCCCTGAC CGACCTGCCC
AACCGCACCC TTCTGGAGGA GCGCCTGAGC CTCGCCCTGG AGACGGCGGC GGAGAACGGG
GCGAGCGTGG CGCTGGTCTA TCTCGACCTC GACCGCTTCA AGCCCGTCAA CGACTTCCAC
GGCCACGCCG CGGGCGACGC CCTGCTGGTG CAGGCGGCCA AGCGCATGCT GGCCGAGCTG
CGCCCGACCG ATACCCTCGC CCGGATCGGC GGCGATGAGT TCGTCATCGT CCTCGCCCAT
ACCCGCACAC TCGCCCAGAT CGCCGAGACC GCGGCGCGGC TGGTCGCGGC GCTCGGCCGC
CCGTTCCATC TCGAGGGCCA AAACGAGGGC GAGGGCAAAA GTGAGGGCAA GGGCGAGGGC
ACGAGCGAGG GCAAGAGCGA GGGTCTACGC ATCGAGATCG GCGCCTCGGC GGGCATCGCC
GTCTATCCCA GCGACGGCAG CACCGCCGAG ACCCTGAAGC GGGCCGCGGA CACCGCCCTG
TACCGGGTCA AGGACGAGGG GCGCGGCACG GTGCGCTTCT TCGAGGCCGC GATGGACGAG
CAGCTCCAGG CGCGCCGCCG GATCGAGCAC GAGCTGAGCG GGGCGATCCC GCGGGGCGAG
CTGCAGCTTT ACTACCAGCC GATCGTCAAC GGCCGCACCG GCGAGATCGA GACCTTCGAG
GCGCTGATCC GCTGGCACCA TCCCGAGCGC GGCTGCGTGC CTCCGGCCGA CTTCATCCCG
CTCGCCGAGC AGACCGACCA GATCGGGCGG ATCGGCGCCT GGGTGCTCGA CACCGCCTGC
GCCGCCGCCG CCGCCTGGCC GCATCCCTGG CGGGTCTCGG TCAACGTCTC ACCCAAGCAG
TTCCGCCAGC CGGGCTTCGC CGCGGGCGTC GCGGCGGTGC TCGGCCGCTA CGGGCTCCCG
CCGGGCCGGC TGGTTCTGGA GATCACCGAG GGCGTGTTCA TCCAGGACGC GACGATGGCG
GTGGAGGTGC TCACGGCGCT GCGCACCCTC GGCGTGCGCC TCGCGCTCGA CGATTTCGGC
ACCGGCTATT CGAGCTTGAG CTACCTGCAG CGGTTCAAGT TCGACAAGAT CAAGGTCGAT
CAGTCCTTCG TGCGCCGGCT CGGGCGGCAC GCCGACACCC TGACGATCGT GCGCGCGATC
ACCCATCTCG GGCACAATCT CGGGCTTCAG GTCACGGTCG AGGGGGTGGA GACGCAAGAG
CAGCTCGCGA TGCTGCGCGA ACTCGGCTGC GACCAGATGC AGGGCTACCT GTTCGCCCGG
CCCGCCCCGA TGACGGAGCT GTCGCAGGCC GGCTCCGCGG ATCGGGAGCG GGCGCGGCTG
CGCGCCCTGT TCGGCGAGAC GTCCGCGCGG GCCTGCGCCT GA
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| Protein sequence | MLNIVACVTN QHDPGLVAVS AGICLLGCFS TVTLMAEAAG AERRALVPWL IAAAAVFGCS
VWSLHFVAML AFRPSAQAAY GLLPTAASIG IAVTGALIAL LIWCRADHHP LKLAAAGMVM
AAAIAGMHYA GVGAMAANSL LLFDGAYVHA SLGLCAILAV TALARAGDLT GLGRRIEVSL
WLALAICGLH FTGMTALTVA PAAPLEEGGA VLGSTQLGLA VGLVSLVVLA AGLAALLMQR
HLMRRRMDEL SRMRLLGNLA HEVLLIHRDG RVVEINQAGL RLFETTLQEI VGRPLLDLFA
DADAPALLRR SRCRPEELRP EEFEIRTAAG LAVPVELSCR AIEYLGRPAT AVALRDLSQR
RRDEARIRHL ALHDALTDLP NRTLLEERLS LALETAAENG ASVALVYLDL DRFKPVNDFH
GHAAGDALLV QAAKRMLAEL RPTDTLARIG GDEFVIVLAH TRTLAQIAET AARLVAALGR
PFHLEGQNEG EGKSEGKGEG TSEGKSEGLR IEIGASAGIA VYPSDGSTAE TLKRAADTAL
YRVKDEGRGT VRFFEAAMDE QLQARRRIEH ELSGAIPRGE LQLYYQPIVN GRTGEIETFE
ALIRWHHPER GCVPPADFIP LAEQTDQIGR IGAWVLDTAC AAAAAWPHPW RVSVNVSPKQ
FRQPGFAAGV AAVLGRYGLP PGRLVLEITE GVFIQDATMA VEVLTALRTL GVRLALDDFG
TGYSSLSYLQ RFKFDKIKVD QSFVRRLGRH ADTLTIVRAI THLGHNLGLQ VTVEGVETQE
QLAMLRELGC DQMQGYLFAR PAPMTELSQA GSADRERARL RALFGETSAR ACA
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