| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Mpop_4457 |
|---|
| Symbol | |
|---|
| ID | 6313699 |
|---|
| Type | CDS |
|---|
| Is gene spliced | No |
|---|
| Is pseudo gene | No |
|---|
| Organism name | Methylobacterium populi BJ001 |
|---|
| Kingdom | Bacteria |
|---|
| Replicon accession | NC_010725 |
|---|
| Strand | + |
|---|
| Start bp | 4752669 |
|---|
| End bp | 4754138 |
|---|
| Gene Length | 1470 bp |
|---|
| Protein Length | 489 aa |
|---|
| Translation table | 11 |
|---|
| GC content | 63% |
|---|
| IMG OID | 642653137 |
|---|
| Product | FeS assembly protein SufB |
|---|
| Protein accession | YP_001927091 |
|---|
| Protein GI | 188583646 |
|---|
| COG category | [O] Posttranslational modification, protein turnover, chaperones |
|---|
| COG ID | [COG0719] ABC-type transport system involved in Fe-S cluster assembly, permease component |
|---|
| TIGRFAM ID | [TIGR01980] FeS assembly protein SufB |
|---|
| 
|
Plasmid Coverage information |
| Num covering plasmid clones | 4 |
|---|
| Plasmid unclonability p-value | 0.0985425 |
|---|
| Plasmid hitchhiking | No |
|---|
| Plasmid clonability | normal |
|---|
| |
Fosmid Coverage information |
| Num covering fosmid clones | 22 |
|---|
| Fosmid unclonability p-value | 0.145425 |
|---|
| Fosmid Hitchhiker | No |
|---|
| Fosmid clonability | normal |
|---|
| |
Sequence |
| Gene sequence | ATGCCTGCAG TGCAGGAGAC CATCGATCGG GTCCGCTCGA TCGACATCGA TCAGTACAAG
TACGGCTTCG AGACCGTCAT CGAGATGGAG AAGTCCGAGA AGGGCCTCTC CGAGGACGTG
ATCCGCTTCA TTTCGGCCAA GAAGAATGAG CCGGAATGGA TGCTCGAATG GCGCCTCGAC
GCCTACAAGC GCTGGCTCAC GATGAAGGAG CCGGAATGGG CCCGCGTCGA CTATGACAAG
GTCGACTACA ACGACATCTA CTACTACGCC GCGCCGAAGC GTAAGGGCCC GGAATCGCTC
GACGAGATCG ATCCCGAGAT CCTCAAGACC TACGAGAAGC TCGGCATCCC GCTGCGTGAG
GTCGAAGCGC TGGAAGGCAT CGCGCCCGAG CGCCGCGTCG CGGTCGATGC CGTGTTCGAC
TCGGTCTCGG TGGCCACCAC CTTCAAGAAG GAACTCGAGA AGGCCGGCGT GATCTTCATG
CCGATCTCCG AGGCCATCCG CGAATACCCG GACCTCGTGA AGACCTATCT CGGCTCGGTC
GTGCCGGTGA CCGACAACTT CTTCGCGACG CTCAACTCGG CGGTCTTCTC CGACGGGTCG
TTCGTCTACA TCCCGCCGGG CGTGCGCTGC CCGATGGAGC TGTCGACCTA TTTCCGCATC
AACGAGCGCG ATACCGGCCA GTTCGAGCGC ACGCTGATCA TCGCCGACAA GGGCTCCTAC
GTCTCGTATC TCGAGGGCTG CACCGCCCCG AAGCGCGACG ACAACCAGCT CCATGCCGCG
GTGGTCGAGC TCGTCGCCCT GGAGGACGCC GAGATCAAGT ACTCGACCGT CCAGAACTGG
TACCCCGGCG ACAACGAGGG CAAGGGCGGC ATCTACAACT TCGTGACCAA GCGCGGCGAT
TGCCGCGGCG CCCGCTCGAA GATCTCGTGG ACGCAGGTCG AGACCGGCTC GGCGATCACC
TGGAAGTACC CGTCCTGCAT TCTGCGCGGC GACGATTCCC GCGGCGAGTT CTACTCGATT
GCGGTGTCGA ACGGCATGCA GCAGGTCGAT TCCGGCACCA AGATGATCCA TCTCGGCAAG
AACACGACCA GCCGGATCAT CTCGAAGGGC ATCTCGGCCG GGCGTTCGCA GAACACCTAC
CGCGGGCTCG TCTCGGCCCA CAAGAAGGCC AAGGGCGCGC GCAACTTCAC CAACTGCGAC
AGCCTGCTGA TCGGCGACCA GTGCGGGGCG CACACCGTGC CCTACATCGA GTCGAAGAAC
GCCTCCGCGG TGTTCGAGCA CGAGGCCACC ACCTCGAAGA TCTCCGAGGA CCAGAAGTTC
TACTGCCAGC AGCGCGGCCT CTCCGAGGAG GAAGCGACCG CGCTCATCGT CAACGGCTTC
GTCCGCGACG TGCTGCAGCA GCTGCCGATG GAGTTCGCGG TGGAGGCCCA GAAGCTGATC
TCGATCAGCC TCGAAGGCTC GGTGGGCTGA
|
|---|
| Protein sequence | MPAVQETIDR VRSIDIDQYK YGFETVIEME KSEKGLSEDV IRFISAKKNE PEWMLEWRLD
AYKRWLTMKE PEWARVDYDK VDYNDIYYYA APKRKGPESL DEIDPEILKT YEKLGIPLRE
VEALEGIAPE RRVAVDAVFD SVSVATTFKK ELEKAGVIFM PISEAIREYP DLVKTYLGSV
VPVTDNFFAT LNSAVFSDGS FVYIPPGVRC PMELSTYFRI NERDTGQFER TLIIADKGSY
VSYLEGCTAP KRDDNQLHAA VVELVALEDA EIKYSTVQNW YPGDNEGKGG IYNFVTKRGD
CRGARSKISW TQVETGSAIT WKYPSCILRG DDSRGEFYSI AVSNGMQQVD SGTKMIHLGK
NTTSRIISKG ISAGRSQNTY RGLVSAHKKA KGARNFTNCD SLLIGDQCGA HTVPYIESKN
ASAVFEHEAT TSKISEDQKF YCQQRGLSEE EATALIVNGF VRDVLQQLPM EFAVEAQKLI
SISLEGSVG
|
|---|
| |