| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Mpop_4456 |
|---|
| Symbol | |
|---|
| ID | 6313698 |
|---|
| Type | CDS |
|---|
| Is gene spliced | No |
|---|
| Is pseudo gene | No |
|---|
| Organism name | Methylobacterium populi BJ001 |
|---|
| Kingdom | Bacteria |
|---|
| Replicon accession | NC_010725 |
|---|
| Strand | + |
|---|
| Start bp | 4751355 |
|---|
| End bp | 4752527 |
|---|
| Gene Length | 1173 bp |
|---|
| Protein Length | 390 aa |
|---|
| Translation table | 11 |
|---|
| GC content | 74% |
|---|
| IMG OID | 642653136 |
|---|
| Product | aminotransferase class V |
|---|
| Protein accession | YP_001927090 |
|---|
| Protein GI | 188583645 |
|---|
| COG category | [E] Amino acid transport and metabolism |
|---|
| COG ID | [COG1104] Cysteine sulfinate desulfinase/cysteine desulfurase and related enzymes |
|---|
| TIGRFAM ID | |
|---|
| 
|
Plasmid Coverage information |
| Num covering plasmid clones | 6 |
|---|
| Plasmid unclonability p-value | 0.259181 |
|---|
| Plasmid hitchhiking | No |
|---|
| Plasmid clonability | normal |
|---|
| |
Fosmid Coverage information |
| Num covering fosmid clones | 22 |
|---|
| Fosmid unclonability p-value | 0.127944 |
|---|
| Fosmid Hitchhiker | No |
|---|
| Fosmid clonability | normal |
|---|
| |
Sequence |
| Gene sequence | ATGACGTCAG CGGCGCGCAG CTATCTCGAT CACAACGCGA CGTCCCCGGT GCGTCCGGAG
GTCGCGATGG CGGTCGCGCG CGCGCTCGAA TTGCCCGGCA ATCCTTCCTC GATCCATGCG
GAGGGCCGCA CCGCACGCCA CGCGCTGCAG ACGGCGCGGG CGCAGCTCGC CGCCCTGGTC
GGGGCGCACC CGGAGCGCGT CACCTTCACC AGCGGCGGCA CCGAGGCGGC CAACGCCGTC
CTCTCCGGCG CCCTGCGCAA GGAGGGCCTT CCCGCCCCCA CCCGCCTGAT GATCTCGGCC
ACCGAGCATC CCTGCGTCGC CGCCGGCCAC CGCTTCACGC CGGAAGCGGT CGAGGTGCTG
CCGGTGGACG CGGCGGGCCT GCTGCGCCTC GACGCCCTGG CGGCGCGCCT CGACGCCTGC
CGCGACGAGG CCGTGCTGGT CTCGGTCCAC GCCGCCAACA ACGAGACCGG GGTGGTGCAG
CCTCTGGCCG AGATCGTGCA GCTGGCCCGC GCCCACGGGC GGGCGCTCGT CCACAGCGAC
GCGGTCCAGG CGGTCGGCAA GATCCCGCTC GATTTTTCCG CCCTCGGCCT CGACGCCCTG
ACCCTGTCCG GCCACAAATT CGCCGCGCCG AAGGGCGTCG GCGCCCTGGT GCTGGCCGAG
GGGGTGAGCC TGGAGACGGC CTTCCTGCGC GGCGGCGGCC AGGAGGCGCG CCTGCGCTGC
GGCACCGAGA ATCTTTCGGG CATTGTCGGC ATGGGCGCGG CGGCAGCAAT CGCCCAGGCT
GCACTGGAGA GCGAGGCGGT GCGGCTCGGG GGCCTGCGCG ACGCGCTCGA AGCGCAGCTC
CGGGCACTCG CTCCCGACGT CGTCGTGTTC GGGGCGGGCG CGCCGCGCCT GCCGAATACG
CTCAGCTTCG CCGTGCCGGG CCTTCCGGCT TCCACGGCGT TGATCGCTCT CGATCTCGCG
GGCCTCGCCG TCTCGTCGGG CTCGGCCTGC GCTTCGGGCA AAGTGGCCCG TTCCCCCGTG
CTCGCGGCGA TGGGCGTGAG CCCTGCGCTC GCCGCAGGGG CGCTGCGCGT CAGCTTCGGC
TGGAATTCGC GCGCGGATGA CCTGTCACGC TTCGTGGCGG GGTTCGAACG GGTCGTTTCG
TCCCTATATC AGCGGCGAGG GCAGGCAGCC TGA
|
|---|
| Protein sequence | MTSAARSYLD HNATSPVRPE VAMAVARALE LPGNPSSIHA EGRTARHALQ TARAQLAALV
GAHPERVTFT SGGTEAANAV LSGALRKEGL PAPTRLMISA TEHPCVAAGH RFTPEAVEVL
PVDAAGLLRL DALAARLDAC RDEAVLVSVH AANNETGVVQ PLAEIVQLAR AHGRALVHSD
AVQAVGKIPL DFSALGLDAL TLSGHKFAAP KGVGALVLAE GVSLETAFLR GGGQEARLRC
GTENLSGIVG MGAAAAIAQA ALESEAVRLG GLRDALEAQL RALAPDVVVF GAGAPRLPNT
LSFAVPGLPA STALIALDLA GLAVSSGSAC ASGKVARSPV LAAMGVSPAL AAGALRVSFG
WNSRADDLSR FVAGFERVVS SLYQRRGQAA
|
|---|
| |