Gene Mpop_4445 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagMpop_4445 
Symbol 
ID6309172 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameMethylobacterium populi BJ001 
KingdomBacteria 
Replicon accessionNC_010725 
Strand
Start bp4738495 
End bp4739763 
Gene Length1269 bp 
Protein Length422 aa 
Translation table11 
GC content73% 
IMG OID642653125 
ProductArsenical pump membrane protein 
Protein accessionYP_001927079 
Protein GI188583634 
COG category[P] Inorganic ion transport and metabolism 
COG ID[COG1055] Na+/H+ antiporter NhaD and related arsenite permeases 
TIGRFAM ID[TIGR01131] ATP synthase subunit 6 (eukaryotes),also subunit A (prokaryotes) 


Plasmid Coverage information

Num covering plasmid clones15 
Plasmid unclonability p-value
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones23 
Fosmid unclonability p-value0.162879 
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGGGCGCGC TCACCCTGAC CCCGAACCTC GCGACCTGGG GCATCGCCGC GCTGGCGACC 
CTCGGCGTGA TCCTGCGCCC CTTCGCCTGG CCCGAAGCGA TCTGGGCGGT GCTCGGCGCA
GCCCTCCTCG TCCTGCTCGG ACTGATCCCC TGGCAGGCCG CCCTGGAGGG CGTGGCCAAG
GGCACCGACG TCTACCTGTT CCTCGTGGGC ATGATGCTGC TGTCCGAGAT CGCCCGGAAG
GAGGGCTTGT TCGACTGGCT CGCCGCCCAC GCGGTGCGGG CCGCCAAAGG GTCGGCGACG
CGGCTGTTCG CCCTCGTCTA CGTCGTCGGC ACGGTGGTGA CGATCTTCCT CTCCAACGAT
GCCTGCGCGG TGGTGCTGAC CCCGGCCGTC TTCGCCGCGA CCCGGGCCGC GGGGGTGAAG
CAGCCCCTGC CCTACCTGTT CGTCTGCGCC TTCATCGCCA ACGCGGCGAG CTTCGTGCTG
CCGATCTCGA ACCCGGCCAA CCTCGTCGTC TTCGCCGAGC ACATGCCGCC GCTCTCGCAA
TGGCTCGCCA CCTTCACCCT GCCCTCTGTC CTCGCCATCG GCGCGACCTA CGCCGTCCTG
CGCTTGACCC AGAACGCGCG GCTGAAGGCC GAGACGGTCG CCGCCGACAT CGCGATCCCG
GTCCTCGGGC GCGGCGGCAC GATCGCGGGC ATCGGCATCG TCGCCACCGG GGCGGCCCTG
ATCGGCGCCT CGGCCGCCGG GATCGAACTC GGCCTGCCGA CCTTCCTCGC CGGTCTGGCC
ACCGCCCTCG TCGTGCTGGC GATCAACCGG GGCGGGCTGG TCGAGGTCGC CCGGGACGTC
TCCTGGGGCG TGCTGCCCCT GGTCGCCGGG CTCTTCGTCC TCGTCGAGGC CCTGGAAAAG
ACGGGCCTGC TGACGCGGCT CGCCGACTGG CTGGGGCACG CCGCGCAGGG CGATCCCGCC
GCCACGGCCT GGGCCGGCGG CGCGCTGGTC GCCTTCGGAT CGAACCTCGT GAACAACCTG
CCGGCGGGCC TCTTGGCGGG CGCCGCGGTG CAGGCCGCGC ATGTGCCGGA CACGGTCGCG
GGGGCGATCC TGATCGGCGT CGATCTCGGG CCGAACCTCT CGGTCACGGG CTCGCTCGCC
ACGATCCTCT GGCTCACCGC GATTCGCCGC GAGGGCGAGG ACGTCTCCGC CTGGGCCTTC
CTGAAGCTCG GCGCGCTCGT CATGCCGCCC GCGCTCGTCC TCGCGCTTGC GGCCCTGCTG
CTCGTCTGA
 
Protein sequence
MGALTLTPNL ATWGIAALAT LGVILRPFAW PEAIWAVLGA ALLVLLGLIP WQAALEGVAK 
GTDVYLFLVG MMLLSEIARK EGLFDWLAAH AVRAAKGSAT RLFALVYVVG TVVTIFLSND
ACAVVLTPAV FAATRAAGVK QPLPYLFVCA FIANAASFVL PISNPANLVV FAEHMPPLSQ
WLATFTLPSV LAIGATYAVL RLTQNARLKA ETVAADIAIP VLGRGGTIAG IGIVATGAAL
IGASAAGIEL GLPTFLAGLA TALVVLAINR GGLVEVARDV SWGVLPLVAG LFVLVEALEK
TGLLTRLADW LGHAAQGDPA ATAWAGGALV AFGSNLVNNL PAGLLAGAAV QAAHVPDTVA
GAILIGVDLG PNLSVTGSLA TILWLTAIRR EGEDVSAWAF LKLGALVMPP ALVLALAALL
LV