| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Mpop_4406 |
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| Symbol | |
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| ID | 6314082 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Methylobacterium populi BJ001 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_010725 |
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| Strand | - |
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| Start bp | 4700572 |
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| End bp | 4701315 |
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| Gene Length | 744 bp |
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| Protein Length | 247 aa |
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| Translation table | 11 |
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| GC content | 72% |
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| IMG OID | 642653087 |
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| Product | short-chain dehydrogenase/reductase SDR |
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| Protein accession | YP_001927041 |
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| Protein GI | 188583596 |
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| COG category | [I] Lipid transport and metabolism
[Q] Secondary metabolites biosynthesis, transport and catabolism
[R] General function prediction only |
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| COG ID | [COG1028] Dehydrogenases with different specificities (related to short-chain alcohol dehydrogenases) |
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| TIGRFAM ID | |
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| 
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Plasmid Coverage information |
| Num covering plasmid clones | 18 |
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| Plasmid unclonability p-value | 1 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | 28 |
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| Fosmid unclonability p-value | 0.851673 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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Sequence |
| Gene sequence | ATGGCCGACA AGATCCTCGA CGGCCGCGTC GCCGTCGTCA CCGGTGCCTC CCGCGGCATC
GGTCGCGCCG CGGCGCTGGC GCTGGCCGGG GCCGGGGCCC ACGTCGTCGC GGTCGCCCGC
ACGCAGGGCG GCCTGGAGGA ACTCGACGAC GCGATCCAGC GGGCCGGCGG CAGCGCGACG
CTGGTGCCGC TCGATCTCAC CGATTACGAC GCCATCGACC GCCTCGGTGC TGCGCTCAAC
GAGCGCTGGG GCCGGCTCGA CGCGGTGGTC GGCAATGCCG GCATCCTCGG CAACCTGATG
CCGGTGAGCC ACGTCACGCC CAAGGTCTGG GATCAGGTGA TGGCGATCAA CGTCACCGCC
AACTGGCGCC TGATCCGCTC GTTCGATCCG CTCCTGCAGC GCTCGGATGC GGGGAGGGCG
ATCTTCGTCT CCTCGGGCGC GGCCGCGAAG TGCCGGGCCT ATTGGGGGCC CTACTCCGTC
TCGAAGGCGG CGCTGGAGGC GATGGTGCGC ACCTACGCCG CCGAGAACGA GCGGACGGGG
GTGCGCGCGA TGCTGCTCAA CCCCGGCCCC CTGCGCACCC GCATGCGCGC GGCGGCGATG
CCGGGCGAAG ACCCGGCCAC GCTCAGGACG CCGGAGGATC TGGCGCCGCA TTTCGTGCGC
CTCGCCTCGC CCGATTGGAA CGAGACGGGC AAACTCTACG ATTTCCCGAG CGACCGGGTT
CTCGCCTTCT CCGCACCCCA GTAA
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| Protein sequence | MADKILDGRV AVVTGASRGI GRAAALALAG AGAHVVAVAR TQGGLEELDD AIQRAGGSAT
LVPLDLTDYD AIDRLGAALN ERWGRLDAVV GNAGILGNLM PVSHVTPKVW DQVMAINVTA
NWRLIRSFDP LLQRSDAGRA IFVSSGAAAK CRAYWGPYSV SKAALEAMVR TYAAENERTG
VRAMLLNPGP LRTRMRAAAM PGEDPATLRT PEDLAPHFVR LASPDWNETG KLYDFPSDRV
LAFSAPQ
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