Gene Mpop_4396 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagMpop_4396 
Symbol 
ID6312523 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameMethylobacterium populi BJ001 
KingdomBacteria 
Replicon accessionNC_010725 
Strand
Start bp4691133 
End bp4692299 
Gene Length1167 bp 
Protein Length388 aa 
Translation table11 
GC content74% 
IMG OID642653078 
Productmetal dependent phosphohydrolase 
Protein accessionYP_001927032 
Protein GI188583587 
COG category[T] Signal transduction mechanisms 
COG ID[COG2206] HD-GYP domain 
TIGRFAM ID[TIGR00277] uncharacterized domain HDIG 


Plasmid Coverage information

Num covering plasmid clones
Plasmid unclonability p-value0.00343832 
Plasmid hitchhikingNo 
Plasmid clonabilitydecreased coverage 
 

Fosmid Coverage information

Num covering fosmid clones27 
Fosmid unclonability p-value0.803975 
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGCAGGAAC CTCGCGACCG ATACGAGCGT CAGGGCACGC ACCGCGAGGA TGTGGTCGTC 
CTCGTCTCGG ATCGCCGCGA GCGGGCGGAG CGCCTCGCCC GCGGCATCGC CCTCGTGCTG
CCCTGCCGGG TGATCGAGCC GGGCGCGGCC CTGCCCTCCG ATCGACCGAT CGCCTTCGTC
GTCGATCTCG CCACCGATCT CGCCGCCGAG CGGGGGAGTG CCTGGATCGT CTGGCTCGCC
GAACGCGTCC GTGAGAGCGG GTTGCCCTGC CTCTATCTCG CCCGCGGCAA CGCCGCCCAG
GACATGGCGG CGGTGCGCCT GCTCGGCACG CCGACGGTGA TCGATCCGCG CCAGTCCGCC
GGCATCGTCC CGACGCTCAT GCGCCTCGTC GCCGAGAGCC AGGCGCGGGG CCAGGTACGG
GGCGGCGTGT CCGGCCGGGG GCGGCGGACG GGCGGGCCCC CCGAGGCGCG GGTGGAGCGG
GCCACCGCCC TCGTCACCCG CCTGTTCGAG GAGGCCGCCG CCGGCCGGCC CCCGAGCCCG
GAGGAGGCCG AGGAGGGCAC GCGCATCGTG CTCGACACGG TTTCCGAGGT CGGCATCCGC
GCTTGGCTCG ACCTCGTCTG GCGCCACGAC CTCCAAGTCT ACCAGCATTC CCTGAGCGTG
GCGGGCTTCG CCGCCGCCTT CGCGGCCGAA CTCGGTTTCT CCCGGAGCGA CCGGCAGCGG
CTGGCCAAGG CCGCGCTCCT GCACGATGTT GGCAAGGCGC TGATCCCGCA AACCATCCTC
AACAAGCCGG GCCCGCTGAC CCCCGACGAG ATGGCGGTGA TGCGCCGGCA TGCCGCGCTG
GGCGCCGACC TGCTGGCCAA GGAGGGCGCC TTCGAGCCCG AGATCCTCGA CGTGGTGCGC
TACCACCACG AGCGCCTCGA CGGATCGGGT TATCCCGAGG GGCTGAAGGG GGCGCGGATC
GGCGATCTCG TGCGGCTCGT GGCGATCTGC GACGTCCACT CCGCCCTGAC CGAGCGCCGG
GTCTACCGCG CGCCGCTCTC CGCCGCCGAG GCCGCCGCGA TCATGCAGGC CCAGGCCGGC
CCGCTCGATC CCGACCTGCT CCGGGTCTAC CGCCCGATCA TCGCCCGCGC CGGCGCCGCC
GCGGGCGGGC CATCCGTTCT GGACTGA
 
Protein sequence
MQEPRDRYER QGTHREDVVV LVSDRRERAE RLARGIALVL PCRVIEPGAA LPSDRPIAFV 
VDLATDLAAE RGSAWIVWLA ERVRESGLPC LYLARGNAAQ DMAAVRLLGT PTVIDPRQSA
GIVPTLMRLV AESQARGQVR GGVSGRGRRT GGPPEARVER ATALVTRLFE EAAAGRPPSP
EEAEEGTRIV LDTVSEVGIR AWLDLVWRHD LQVYQHSLSV AGFAAAFAAE LGFSRSDRQR
LAKAALLHDV GKALIPQTIL NKPGPLTPDE MAVMRRHAAL GADLLAKEGA FEPEILDVVR
YHHERLDGSG YPEGLKGARI GDLVRLVAIC DVHSALTERR VYRAPLSAAE AAAIMQAQAG
PLDPDLLRVY RPIIARAGAA AGGPSVLD