| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Mpop_4389 |
|---|
| Symbol | |
|---|
| ID | 6312706 |
|---|
| Type | CDS |
|---|
| Is gene spliced | No |
|---|
| Is pseudo gene | No |
|---|
| Organism name | Methylobacterium populi BJ001 |
|---|
| Kingdom | Bacteria |
|---|
| Replicon accession | NC_010725 |
|---|
| Strand | - |
|---|
| Start bp | 4681192 |
|---|
| End bp | 4682496 |
|---|
| Gene Length | 1305 bp |
|---|
| Protein Length | 434 aa |
|---|
| Translation table | 11 |
|---|
| GC content | 74% |
|---|
| IMG OID | 642653071 |
|---|
| Product | Patatin |
|---|
| Protein accession | YP_001927025 |
|---|
| Protein GI | 188583580 |
|---|
| COG category | [R] General function prediction only |
|---|
| COG ID | [COG1752] Predicted esterase of the alpha-beta hydrolase superfamily |
|---|
| TIGRFAM ID | |
|---|
| 
|
Plasmid Coverage information |
| Num covering plasmid clones | 7 |
|---|
| Plasmid unclonability p-value | 0.525618 |
|---|
| Plasmid hitchhiking | No |
|---|
| Plasmid clonability | normal |
|---|
| |
Fosmid Coverage information |
| Num covering fosmid clones | 29 |
|---|
| Fosmid unclonability p-value | 1 |
|---|
| Fosmid Hitchhiker | No |
|---|
| Fosmid clonability | normal |
|---|
| |
Sequence |
| Gene sequence | ATGCCGAAAC TGTACAACGA ACCGAGCTTA CGGATCGCCC GGGCGGACCG GAGCCTTGCC
GGGCGGCGTT GGTCCGGCCT GGGCCGTCCC CTGGCGGGCG TCCTCGTGGC GCTGACCCTG
TCGCAGGGGG CGCTGGCGGG CGAACGAACG AAAAAACCCG CCGACGCGCG GCCGGACTAC
ACCGCCGCCC AGGCCGCGAC CGCGCGGCCC GAGGGCCTGC CGGCCTCGGT GCGGATCGCG
GGTGACGACG TGAGCGCCTT CCAGGCGCTG ATCGACGGGG CGCCCCGCGC CGTCGATCCC
TGGCTGGTGC TCTCCGGCGG CGGTGAGAAC GGCGCCTTCG CCGCCGGCCT GCTGGCGGGC
TGGTCGGAGC GCGGCGACCG TCCCGATTTC GGCGTGATCA CCGGCGTCTC GACCGGCGCG
CTGATCGCGC CCTTCGCCTT CGCGGCGCCG ACGATCGGGG CGAAGGCCGA CGCGGCGCTG
AAGGCGAACT ACACCGAGAT CTCGGCGGCC GACGTGTTCG AGTTCGGCGG CACGCCGGAT
TCGCTCACCG ACACGTGGCC GCTCAAGGAG CGGATCGGGC GCGCGGTGAC GCCGGCCCTG
CTCAAGGCGG TGGCGGCCGA GCACGCCAAG GGCCGCCGCC TGCTGATCGC CACGACGCAG
GTCGACAGCG AGCGGCCGGT CCTGTGGGAC ATGGGCGCGA TCGCCCAGCG CAACGCCGAG
ACCGGCGATC CCCGGGCGCT GGCCCTGTTC CGCGCGATCG TCCTCGCCTC GACGGCGGTG
CCCGGCGTCT TCCCGCCGGT GGCGATCCCC GCCGAGGCCA AGGATGGGGG CAAGGACAAG
CCCTTCGCAG AGCTGCACGA CGACGGCGGG GCGATGGCCC CGTTCTACCT CGCGCCGGCC
GCCGCCCTGG AGGGAGAGGC GCGGCTGCGC CTGCCGACGG ACCGGGTCTA CCTCGTCGTC
AACAACCGGC TCGAACCGGA ATTCCAGATG GCCTCGCGCA CCACGCTCTC GGTGCTCGGC
CGCACCATGT CGGCGGCGAT CAAGGCACAG ACCCGCGCGG CGCTCGCGCT CTCCAAGGGC
TATGCCGAGC GCACCGGCCT CGACCTGCGG ATCGCGCTCA TCGACGGGCG CTTCGCCAAG
ACCTCGGAGA AGCCGTTCGA CCAAGCCTAC ATGAAGGCGC TGTTCGCCCA CGGCGAGGCC
CTGGCCCGCG ACGGCAGCGC CTTCGTCCAG GCTCGCCCCC CGGCCACGGC TGCGAGCCGG
CCCATTCCCT CGGAGACGAC CGGCAGCGTC ACGGCCTCGC GCTGA
|
|---|
| Protein sequence | MPKLYNEPSL RIARADRSLA GRRWSGLGRP LAGVLVALTL SQGALAGERT KKPADARPDY
TAAQAATARP EGLPASVRIA GDDVSAFQAL IDGAPRAVDP WLVLSGGGEN GAFAAGLLAG
WSERGDRPDF GVITGVSTGA LIAPFAFAAP TIGAKADAAL KANYTEISAA DVFEFGGTPD
SLTDTWPLKE RIGRAVTPAL LKAVAAEHAK GRRLLIATTQ VDSERPVLWD MGAIAQRNAE
TGDPRALALF RAIVLASTAV PGVFPPVAIP AEAKDGGKDK PFAELHDDGG AMAPFYLAPA
AALEGEARLR LPTDRVYLVV NNRLEPEFQM ASRTTLSVLG RTMSAAIKAQ TRAALALSKG
YAERTGLDLR IALIDGRFAK TSEKPFDQAY MKALFAHGEA LARDGSAFVQ ARPPATAASR
PIPSETTGSV TASR
|
|---|
| |