Gene Mpop_4387 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagMpop_4387 
Symbol 
ID6312704 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameMethylobacterium populi BJ001 
KingdomBacteria 
Replicon accessionNC_010725 
Strand
Start bp4678840 
End bp4679928 
Gene Length1089 bp 
Protein Length362 aa 
Translation table11 
GC content72% 
IMG OID642653069 
Productplasmid encoded RepA protein 
Protein accessionYP_001927023 
Protein GI188583578 
COG category 
COG ID 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones10 
Plasmid unclonability p-value
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones28 
Fosmid unclonability p-value
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGTCGGGGC TGGAGGCCAA GATCGCCGCG ATCCGCGACC CGGATCTGCT GGCGGAGCTG 
GAGGCGGCGC GGGGCGGGTT CCTGTTCGCG CCGATCGTCG AGCATCTGCT GTTCCGCCAG
CGCGAGCGCG ATGCCGCCCG GGCGCAGGAG GGCGCGCAGG CCGAGGCCCG CGAGGCCATG
GGCCGCGACC GCCGCCGCCG CGACGCCGTG CGCGAGGTGA TCGAGAACGA GCCGACGGGC
CCGGAGAACC TGCAGCACCT GCATTCCGTG CTGGCACTCT GCGGCCTGCC CTACCGCGAT
CCGGGCGATG CCCGCGACTT CGTGCGCGAA TACGGCCGCA ACTCGCTCAG CCTCTCGGCC
GGGCGCCTCA AGAACCCGGT CACCGGCGAG ATGGAGCTGC AGGGCCTGCC CTACGGCCCC
AAGGCCCGGC TGGTGCTGCT GCACCTCTGC ACCGAGGCGG TGCGCCAGAG GAGCCCCACC
ATCGAGGTCG CCGACAGCCT CTCCGGCTTC ATGAAGGCCA TGGGCTTCGC CGTCACCGGC
GGCGAGCGCG GCACCATCGG CGCCTTCAAG GAACAGCTCA ACCGCCTCGC CGCCTGCTCG
ATGCAGCTCG GCCTGTGGGA CGGGGAGGGG CAGGCCTCGA CCCTCAACGT GCCGCCCTTC
CGCCAGCTCG AATTGTGGCG GCGCGGCGAG GACGGCCTCG TCTGGCAGCG CACCGTCTCG
TTCCATCAGG ATTTCTACGA CAGCCTGATC CGCCACGCCC TGCCGGTCGA TATCCGCGCG
GCCCGCGCCT TCTCCGGCTC GGCGCGCAAG CTCGACCTCC TGTTCTGGAC CGGCTATCGG
CTCCGCGCCC TCCAGCGGCC CCTGCGGCTG ACCTGGGACA ACCTGCACCG CCAGTTCGGC
GCCGAGAATG CCAGCCTGCG CAGCTTCCGC CAGGCCTTCA AGGCGGACCT CGCCGGCCTG
CTCGAGGTGT TTCCGCGGCT GCGGATCGAT CTCGACGAGG GCGGCATGCT GCTCCACCCG
GCCGATCCCG GCAGCCTCTT GGTGCCGCCC AAGGCTGCTC GCCCCGCGCG CGCGGCGGCC
CGCGCCTGA
 
Protein sequence
MSGLEAKIAA IRDPDLLAEL EAARGGFLFA PIVEHLLFRQ RERDAARAQE GAQAEAREAM 
GRDRRRRDAV REVIENEPTG PENLQHLHSV LALCGLPYRD PGDARDFVRE YGRNSLSLSA
GRLKNPVTGE MELQGLPYGP KARLVLLHLC TEAVRQRSPT IEVADSLSGF MKAMGFAVTG
GERGTIGAFK EQLNRLAACS MQLGLWDGEG QASTLNVPPF RQLELWRRGE DGLVWQRTVS
FHQDFYDSLI RHALPVDIRA ARAFSGSARK LDLLFWTGYR LRALQRPLRL TWDNLHRQFG
AENASLRSFR QAFKADLAGL LEVFPRLRID LDEGGMLLHP ADPGSLLVPP KAARPARAAA
RA