Gene Mpop_4377 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagMpop_4377 
Symbol 
ID6312765 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameMethylobacterium populi BJ001 
KingdomBacteria 
Replicon accessionNC_010725 
Strand
Start bp4670953 
End bp4671810 
Gene Length858 bp 
Protein Length285 aa 
Translation table11 
GC content76% 
IMG OID642653059 
Productaminotransferase class IV 
Protein accessionYP_001927013 
Protein GI188583568 
COG category[E] Amino acid transport and metabolism
[H] Coenzyme transport and metabolism 
COG ID[COG0115] Branched-chain amino acid aminotransferase/4-amino-4-deoxychorismate lyase 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones
Plasmid unclonability p-value0.505275 
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones26 
Fosmid unclonability p-value0.583274 
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGCTGTGGT CTGACGGCCG GCTGGTCGAG GGCGGCACCC TCCCCTTCGC CATGGCCGAC 
CGCGGCCTGC TGCTCGGCGA CGGGGTGTTC GACACCGCCC TCGCCGTTCA GGGCCGGGTC
GCCTTCGAGG TTGCCCATGC CGACCGCCTC GCCGCCGCCG CCGCGGCGCT CGGCTTTTCC
GTCGAACGGA CGCGGATCGT CGAGGCGATG CGCGCGCTCG CGGGCACCGC CCCGCTCGCG
GCGATCCGCA CCACGCTGAC CCGCGGCCCC GGCCCGCGCG GGCTCGCGCC GCCGCCCGAG
CCGAGCCCGT TCCTGTTCGG CAGCGCCGCG CCGGCTCGCG CCGGCCTGTT CTTCGCGCCC
CTGCGGCTGA TGCCGACGGA GATTGCCCGC AACGAGACCT CGCCGGCCGC CCGCCTCAAG
ACGCTCGGCT ATCTCGACGC GGTGCTCGCC GCCCGGGATG CGCAGGCGCA AGGCTTCGAC
GAGGCCCTGT TCCTCAACAC CGCGGGCCGT GTCGCCTGCG CCGGCACCGG CAATGTTTTC
GCGATCCTTG GCGCGACGCT GGTGACGCCG CCGCTCGGCG AGGGCGTGCT GCCGGGGATC
GTCCGCGCCG AGATCCTCTC GAACCTCGCG CCGGGGCTCG GCCTCACGGT CGAGGAGCGC
CCTCTCCTGC CCTCCGAACT GGAGGCCGCG GAGGCCCTGT TCGTCACCAA CTCCCTGCGC
CTGCTCGCGC CCGTGACGGC GCTCGGCGCG CGCGTCTACG ACAGCGCCGG GCACGGCACG
GTTCGGCGTC TCGGCGCGGC TTTGCGGGAG GCGGTGGCGG CGGAATGCGG GGTCGGGGCG
GACGCGCTCG ACCCGTGA
 
Protein sequence
MLWSDGRLVE GGTLPFAMAD RGLLLGDGVF DTALAVQGRV AFEVAHADRL AAAAAALGFS 
VERTRIVEAM RALAGTAPLA AIRTTLTRGP GPRGLAPPPE PSPFLFGSAA PARAGLFFAP
LRLMPTEIAR NETSPAARLK TLGYLDAVLA ARDAQAQGFD EALFLNTAGR VACAGTGNVF
AILGATLVTP PLGEGVLPGI VRAEILSNLA PGLGLTVEER PLLPSELEAA EALFVTNSLR
LLAPVTALGA RVYDSAGHGT VRRLGAALRE AVAAECGVGA DALDP