Gene Mpop_4370 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagMpop_4370 
Symbol 
ID6312901 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameMethylobacterium populi BJ001 
KingdomBacteria 
Replicon accessionNC_010725 
Strand
Start bp4665545 
End bp4666396 
Gene Length852 bp 
Protein Length283 aa 
Translation table11 
GC content69% 
IMG OID642653052 
Productglycoside hydrolase family 25 
Protein accessionYP_001927006 
Protein GI188583561 
COG category[M] Cell wall/membrane/envelope biogenesis 
COG ID[COG3757] Lyzozyme M1 (1,4-beta-N-acetylmuramidase) 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones14 
Plasmid unclonability p-value
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones23 
Fosmid unclonability p-value0.241431 
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGTCGCTGG ACACCGAAAT TTCCTCGAGG CGCGCACCGG CTCCGCGCGG CTGGCTCAAG 
CGCGGGCTCG CCGCCCTGCT GCTGTCCGGG CTCGCGGCCT GCGCCGCCCA GAACGACTTC
TACCCCACCA AGGGCGACGC CAAGCCCCAT CCGGGCGTGG CACGGGCCAA GAGCCACCCG
ATCCAGGGCA TCGACATCTC GAAATGGCAG GGGCCGATCA ACTGGGCCTC GGTCAAGAGC
GCGGGCACGC AGTTCGCCTA TATCAAGGCG ACGGAGGGCG GCGACCACGT CGACGAGCGC
TTCCGCGAGA ACTGGGACGG CGCGGGCCGG GCCGGCGTGC CGCGGGGCGC CTACCACTTC
GTGTTCTGGT GCCGCTCGGC CGAGGACCAG ATGGCGTGGT TCAAGCGCAA CGTGCCGAAC
GATCCGACCG CCCTGCCCCC GGTGCTCGAC GTGGAGTGGA ACGGCCACTC GGCCAAGTGT
CCGAAGAAGC TGCCCAAGCC CCAGGCGCTC GCCATGATCC GCTACATGCT GGATGAGATG
GAGGCCTATA CGGGCAAGCG GCCGATCATC TACACCGACA TCACCTTCCA CAAGGACGTG
CTGGAAGACG AGCTGCCCGA CTACCCCCAC TGGGTCCGCT CCACCGCGGC CGAGCCCGAG
CAGCGCTACG CCAACCGCAA GTGGATGCTC TGGCAGTTCA CCTCGACCGG CCGCGTGCCC
GGCGTGCGCG GCGACGTCGA CCGCAACGCC TTCTACGGCA CCCCGACAGA GTGGGCCTCG
TTCCTCGCCA CCGATTGCGA TCCGCGGGAG CATCGGCGCC TGTCGAGCCA GGGGCTCTGC
ACCGGCAAGT AG
 
Protein sequence
MSLDTEISSR RAPAPRGWLK RGLAALLLSG LAACAAQNDF YPTKGDAKPH PGVARAKSHP 
IQGIDISKWQ GPINWASVKS AGTQFAYIKA TEGGDHVDER FRENWDGAGR AGVPRGAYHF
VFWCRSAEDQ MAWFKRNVPN DPTALPPVLD VEWNGHSAKC PKKLPKPQAL AMIRYMLDEM
EAYTGKRPII YTDITFHKDV LEDELPDYPH WVRSTAAEPE QRYANRKWML WQFTSTGRVP
GVRGDVDRNA FYGTPTEWAS FLATDCDPRE HRRLSSQGLC TGK