Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | Mpop_4370 |
Symbol | |
ID | 6312901 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Methylobacterium populi BJ001 |
Kingdom | Bacteria |
Replicon accession | NC_010725 |
Strand | - |
Start bp | 4665545 |
End bp | 4666396 |
Gene Length | 852 bp |
Protein Length | 283 aa |
Translation table | 11 |
GC content | 69% |
IMG OID | 642653052 |
Product | glycoside hydrolase family 25 |
Protein accession | YP_001927006 |
Protein GI | 188583561 |
COG category | [M] Cell wall/membrane/envelope biogenesis |
COG ID | [COG3757] Lyzozyme M1 (1,4-beta-N-acetylmuramidase) |
TIGRFAM ID | |
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Plasmid Coverage information |
Num covering plasmid clones | 14 |
Plasmid unclonability p-value | 1 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
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Fosmid Coverage information |
Num covering fosmid clones | 23 |
Fosmid unclonability p-value | 0.241431 |
Fosmid Hitchhiker | No |
Fosmid clonability | normal |
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Sequence |
Gene sequence | ATGTCGCTGG ACACCGAAAT TTCCTCGAGG CGCGCACCGG CTCCGCGCGG CTGGCTCAAG CGCGGGCTCG CCGCCCTGCT GCTGTCCGGG CTCGCGGCCT GCGCCGCCCA GAACGACTTC TACCCCACCA AGGGCGACGC CAAGCCCCAT CCGGGCGTGG CACGGGCCAA GAGCCACCCG ATCCAGGGCA TCGACATCTC GAAATGGCAG GGGCCGATCA ACTGGGCCTC GGTCAAGAGC GCGGGCACGC AGTTCGCCTA TATCAAGGCG ACGGAGGGCG GCGACCACGT CGACGAGCGC TTCCGCGAGA ACTGGGACGG CGCGGGCCGG GCCGGCGTGC CGCGGGGCGC CTACCACTTC GTGTTCTGGT GCCGCTCGGC CGAGGACCAG ATGGCGTGGT TCAAGCGCAA CGTGCCGAAC GATCCGACCG CCCTGCCCCC GGTGCTCGAC GTGGAGTGGA ACGGCCACTC GGCCAAGTGT CCGAAGAAGC TGCCCAAGCC CCAGGCGCTC GCCATGATCC GCTACATGCT GGATGAGATG GAGGCCTATA CGGGCAAGCG GCCGATCATC TACACCGACA TCACCTTCCA CAAGGACGTG CTGGAAGACG AGCTGCCCGA CTACCCCCAC TGGGTCCGCT CCACCGCGGC CGAGCCCGAG CAGCGCTACG CCAACCGCAA GTGGATGCTC TGGCAGTTCA CCTCGACCGG CCGCGTGCCC GGCGTGCGCG GCGACGTCGA CCGCAACGCC TTCTACGGCA CCCCGACAGA GTGGGCCTCG TTCCTCGCCA CCGATTGCGA TCCGCGGGAG CATCGGCGCC TGTCGAGCCA GGGGCTCTGC ACCGGCAAGT AG
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Protein sequence | MSLDTEISSR RAPAPRGWLK RGLAALLLSG LAACAAQNDF YPTKGDAKPH PGVARAKSHP IQGIDISKWQ GPINWASVKS AGTQFAYIKA TEGGDHVDER FRENWDGAGR AGVPRGAYHF VFWCRSAEDQ MAWFKRNVPN DPTALPPVLD VEWNGHSAKC PKKLPKPQAL AMIRYMLDEM EAYTGKRPII YTDITFHKDV LEDELPDYPH WVRSTAAEPE QRYANRKWML WQFTSTGRVP GVRGDVDRNA FYGTPTEWAS FLATDCDPRE HRRLSSQGLC TGK
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