| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Mpop_4369 |
|---|
| Symbol | |
|---|
| ID | 6312900 |
|---|
| Type | CDS |
|---|
| Is gene spliced | No |
|---|
| Is pseudo gene | No |
|---|
| Organism name | Methylobacterium populi BJ001 |
|---|
| Kingdom | Bacteria |
|---|
| Replicon accession | NC_010725 |
|---|
| Strand | - |
|---|
| Start bp | 4664512 |
|---|
| End bp | 4665273 |
|---|
| Gene Length | 762 bp |
|---|
| Protein Length | 253 aa |
|---|
| Translation table | 11 |
|---|
| GC content | 69% |
|---|
| IMG OID | 642653051 |
|---|
| Product | putative transcriptional regulator, Crp/Fnr family |
|---|
| Protein accession | YP_001927005 |
|---|
| Protein GI | 188583560 |
|---|
| COG category | [T] Signal transduction mechanisms |
|---|
| COG ID | [COG0664] cAMP-binding proteins - catabolite gene activator and regulatory subunit of cAMP-dependent protein kinases |
|---|
| TIGRFAM ID | |
|---|
| 
|
Plasmid Coverage information |
| Num covering plasmid clones | 13 |
|---|
| Plasmid unclonability p-value | 1 |
|---|
| Plasmid hitchhiking | No |
|---|
| Plasmid clonability | normal |
|---|
| |
Fosmid Coverage information |
| Num covering fosmid clones | 24 |
|---|
| Fosmid unclonability p-value | 0.324927 |
|---|
| Fosmid Hitchhiker | No |
|---|
| Fosmid clonability | normal |
|---|
| |
Sequence |
| Gene sequence | ATGCCTTCGG CCACAGAGCG GTGCTTTGAA GGCAATCTGC TCCTCGCGTG TCTGAGCCCC
AAGGATCGCG GCCTGCTCCT GCCCGACATG GAGCGGCTGG AATACCAGCG CGGCGAGACG
CTGTTCGCCG CCGGCCGCGA GGTGGATTTC ATCACCTTCC CCCTCGACCA GACCGTGGTC
ACCCTGCTGA TCTCGATGAT CGACGGGCGC AGCGCCGAGA CCGCCACGAT CGGCCGCGAG
GGCGCGGTGG GCGGCGTGGT CAGCAACGGC GGCCTGCCGG CCTCGACCCA TGCCCTGATC
CAGATCGCCG GCCCGATCCT GCGGATGGAG TCGGTGCGGC TGCAGGAGGT CAAGCGGCGC
TCGGAATCCC TGCGCAACCT GTTCACCCGC TACTCCGACT GCCTGCTCGC GCAGGTGCTG
CAATCGGTGG CCTGCAACGC GCTCCATCCG ATCGAGGAGC GCTGCCTGCG CTGGCTGCTG
ACGCTTCAGG ACCGGCTCGA CAGCAACGTC CTGCCGATCA CCCAGGAGGC GCTCGCGGCG
ATGCTCGGCG TGCAGCGCAC CTATCTCACC CGCATCCTGC GGATGCTGCA GCAGCAGGGG
CTGATCGAGG TCGGGCGCGG GCGCATCACC GTCCTCAACC GAACGGCGAT CGAGACGGTC
GCCTGCGAGT GTCATGCCTG CGTCAAGCGG CATTACGAGA CCGTGCTCGG CGCCGTCTAC
AGCCCGAGCG GGCGGCTCGT CGCGATCGAG CCGCCCGAGT AG
|
|---|
| Protein sequence | MPSATERCFE GNLLLACLSP KDRGLLLPDM ERLEYQRGET LFAAGREVDF ITFPLDQTVV
TLLISMIDGR SAETATIGRE GAVGGVVSNG GLPASTHALI QIAGPILRME SVRLQEVKRR
SESLRNLFTR YSDCLLAQVL QSVACNALHP IEERCLRWLL TLQDRLDSNV LPITQEALAA
MLGVQRTYLT RILRMLQQQG LIEVGRGRIT VLNRTAIETV ACECHACVKR HYETVLGAVY
SPSGRLVAIE PPE
|
|---|
| |