| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Mpop_4338 |
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| Symbol | rpoH2 |
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| ID | 6313543 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Methylobacterium populi BJ001 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_010725 |
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| Strand | + |
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| Start bp | 4622374 |
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| End bp | 4623246 |
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| Gene Length | 873 bp |
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| Protein Length | 290 aa |
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| Translation table | 11 |
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| GC content | 70% |
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| IMG OID | 642653023 |
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| Product | RNA polymerase factor sigma-32 |
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| Protein accession | YP_001926979 |
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| Protein GI | 188583534 |
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| COG category | [K] Transcription |
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| COG ID | [COG0568] DNA-directed RNA polymerase, sigma subunit (sigma70/sigma32) |
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| TIGRFAM ID | [TIGR02392] alternative sigma factor RpoH
[TIGR02937] RNA polymerase sigma factor, sigma-70 family |
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Plasmid Coverage information |
| Num covering plasmid clones | 7 |
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| Plasmid unclonability p-value | 0.239407 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | 26 |
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| Fosmid unclonability p-value | 0.531435 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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Sequence |
| Gene sequence | ATGGCAGAGA TCGCGGGGAT GCGGCGTCAG TTCATTCGAA CAGCGATGGA GGCGCCGTTC
CTAGCGAGGG AAGAAGAGCG TGGGCTGGCG GTGGCCTGGA AGGAGGCGCG CGACGAGCGC
GCCCTGCACC GCCTGATCTC CGCGCATATG CGCCTCGTGA TCGCGCTCGC CGGCCGCTTC
CGCCATTACG GCCTGCCGAT GGCCGACCTC GTGCAGGAGG GCCATGTCGG CCTGATGGAG
GCCGCCGCCC GCTTCGAGCC GGAGCGGGAT GTCCGCTTCT CCACCTACGC CACGTGGTGG
ATCCGCGCCT CGATCCAGGA CTACATCCTG CGCAACTGGT CGATCGTGCG CGGCGGAACC
AGTTCGGCGC AGAAGGCGCT GTTCTTCAAC CTGCGCCGCC TGCGCGCTCG GCTGATGCAA
TCCACCGAGG AGCAGGTCGG CTCCGAGATC CACGGGCGGA TCGCCAGCGC GATCGGCGTC
TCCCGCGAGG ACGTGGCGCT GATGGATGCG CGCCTGTCCG GCCCGGACAT GTCGCTGAAT
GCGCCTGTCG GCGAGGAGAG CGAGGCCTCC TCCGAGCGGA TGGACTTCCT CGTCGACAAC
GCGGCCCTGC CCGACGAGAC GGTCTCCGCC CTGGTCGACG GCGAGCGGCG CTTGGTCTGG
CTGCGGCAGG CGTTGACGGT GCTCTCCGAG CGCGAGTTGC GCATCCTGCG GGAGCGGCGG
CTCGCCGAGG ATCAGGCGAC TCTCGAAGCC CTGGGCCACC GCCTCGGCAT CTCGAAGGAA
CGGGTCCGCC AAATCGAGAA CCGGGCCCTG GAGAAGCTGC GCCGGGCCCT GGCCGAGAAG
TTCCCGCAGG CGCCAGCGAG CGTCTACGCC TGA
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| Protein sequence | MAEIAGMRRQ FIRTAMEAPF LAREEERGLA VAWKEARDER ALHRLISAHM RLVIALAGRF
RHYGLPMADL VQEGHVGLME AAARFEPERD VRFSTYATWW IRASIQDYIL RNWSIVRGGT
SSAQKALFFN LRRLRARLMQ STEEQVGSEI HGRIASAIGV SREDVALMDA RLSGPDMSLN
APVGEESEAS SERMDFLVDN AALPDETVSA LVDGERRLVW LRQALTVLSE RELRILRERR
LAEDQATLEA LGHRLGISKE RVRQIENRAL EKLRRALAEK FPQAPASVYA
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