| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Mpop_4323 |
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| Symbol | |
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| ID | 6309619 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Methylobacterium populi BJ001 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_010725 |
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| Strand | - |
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| Start bp | 4607364 |
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| End bp | 4609514 |
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| Gene Length | 2151 bp |
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| Protein Length | 716 aa |
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| Translation table | 11 |
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| GC content | 71% |
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| IMG OID | 642653008 |
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| Product | diguanylate cyclase/phosphodiesterase with PAS/PAC sensor(s) |
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| Protein accession | YP_001926964 |
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| Protein GI | 188583519 |
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| COG category | [T] Signal transduction mechanisms |
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| COG ID | [COG5001] Predicted signal transduction protein containing a membrane domain, an EAL and a GGDEF domain |
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| TIGRFAM ID | [TIGR00229] PAS domain S-box
[TIGR00254] diguanylate cyclase (GGDEF) domain |
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Plasmid Coverage information |
| Num covering plasmid clones | 4 |
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| Plasmid unclonability p-value | 0.398035 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | 31 |
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| Fosmid unclonability p-value | 1 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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Sequence |
| Gene sequence | ATGTCCTACG GGGAAGCCAT GCCCTTGAAC GATTTCGAAG CGTTGGCGCG AATCGCCTTC
GATTGGCTCT GGGTCACCGA TGCCGAGGAT CGATTCAGCT ACATCTCTCC GGGCGCCGAG
CCGATGCTGG GCCGCCCGCC CACGAGCCTG ATCGGCACCC AGCGATCGGC CATGATCTGC
GAGGCGGCGG GCGCGAGCCT GGCCACCTAT CGCGAGACGA TCGCCGCCCG CCGCCCGTTC
CGCGAACTGA CCTACGTCTA CCGGCATCCC GACGGCACGC CGCGCTGGTT CGAGATCAGC
GGGCGCCCGC ATTTCTCGGC CGAGGGCACG TTCCTGGGCT ACCAGGGGGT CGGCAGCGAC
GTCACCGAGC AGCACCGGAC CCGCCTCGCC CTCGTCGAGG CGCATGCCGA ACTCAGCGAG
CAGAACCGGC GCTTCGACGC GGCGCTGGAG AACATGACCC ACGGCCTGTG CATGTTCGAT
GCGGAGCAGC GGCTGCTGGT GTGGAACCGG CGCTACTTGG AGATCTTCGG CCTGCCCGAG
GGCGCGCTCC ATGTCGGCAT GGGCCAGCGC GCCATCATCG AGGTGCTGGT GGCGCTCGGG
CGCTACAAGC GCGGGCTGAC CGTCGATGCG GTGAGCGAGG GCACCCGCAC GTCGCTGACC
GACGAGGGGC CGAAGGCGGT GCTGCGCGAA CTCGCCGACG GGCGGGTCAT CGCCGTGACC
CACCGGCCCA TGGCCGAGGG CGGCGGCTGG GTGGCGACCT TCGAGGACAT CACCGAACGG
CGGCGCAACG AGGCGCGCAT CATCCACATG GCCCGCCACG ACGGGCTCAC CGACCTGCCC
AACCGCACCC GCCTGCGCGA GATCGGGGCC GAGCGGGTCG AGGCGCTGCG GACGGGCGCG
GACGGGCAGC TCGCCGTGCT CTGCCTCGAC CTCGACCGGT TCAAGCCGGT CAACGACAGC
TTCGGCCACG CGGTGGGCGA TGCCCTGCTG CGGGCGGTGG CCGGGCGGCT GCGGGGGCAT
GTGCGCGGAC ACGACGTGGT CGCCCGGCTC GGCGGCGACG AGTTCGCGGT GCTCTCCCAC
GTCGAGGACG CGGCCGGGGC CATGGGGCTG GCCGAGCGCC TGATCGAGAT CGTCGCCGCG
CCCTACCGCC TCGACGGGAT CACCGTCGAG ATCGGGATGA GCGTCGGCAT CGCTCTGGCA
GGGGCCGAGG ACGACCTCCC GCGGGACATC GAATGCCTCC TCAAGGAGGC CGACATCGCC
CTCTACGAGG CCAAGACGGG CGGGCGCGGC ACCGCCCGCC TGTTCGAGCC GCAGATGGAC
GCGACCCTGC GTGAGCGGCT CGGCCTCGAA CGCGAACTGC GCGAGGCGCT GGCGCAGAGC
CGGTTCGAAC TGCACTACCA GCCCCTCGTG GATCTCTCCG ATAACCGCAT CACCGGCATG
GAGGCGCTGG TGCGCTGGCG CCATCCCGAG CGCGGCCTCG TGAACCCGGC GGTGTTCATC
CCGCTGGCGG AGGAGACCGG CCTGATCGTG CCGATCGGCG AGTGGGTGCT GAGCCAGGCC
TGCCGCGACG CCGCCGCCTG GCCGGACGCG ATCAGCGTGG CGGTCAACGT CTCGCCGCTG
CAGCTGCGCA ACCGCGGCTT CGTTCAGAGC GTGCTCGGCG CGCTGGCGAC CAGCGGCCTC
AAGGCGAGCC GGCTGGAACT GGAGATCACC GAGAGCGTGC TGCTCGACGA CACCGAGGTG
AACCTCGAGA CGCTGCACAG CCTGCGCCGG CTCGGGGTGC GCATCTCCAT GGACGATTTC
GGCACCGGTT ATTCCTCGAT CAGCTATCTG CGCCGCTTCC CCTTCGACAA GATCAAGATC
GACCGCTCCT TCGTGCCCGA CTCCGCCGGG CAGTCGGATG CCGGCGCGAT CATCCGCGCC
ATCGTCAGCC TCGGAGCGAG TCTCGGCATC ACCACGCTGG TCGAGGGCGT CGAGACCGAG
CCGCAGCTCG CCACCATCCG CGCGGAGGGG GCGCAGGAGG TGCAGGGCTA CCTGTTTAGC
CCGCCCCGGC CCGTCCACGA GATCGCGGTC CTGCTCGAAG CCGGGATCGC CTCCGGGGTC
GGCAAGGCGG CCAATCCGCC GGAAATCCCG GCCCGGACGC TGGCGGCCTG A
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| Protein sequence | MSYGEAMPLN DFEALARIAF DWLWVTDAED RFSYISPGAE PMLGRPPTSL IGTQRSAMIC
EAAGASLATY RETIAARRPF RELTYVYRHP DGTPRWFEIS GRPHFSAEGT FLGYQGVGSD
VTEQHRTRLA LVEAHAELSE QNRRFDAALE NMTHGLCMFD AEQRLLVWNR RYLEIFGLPE
GALHVGMGQR AIIEVLVALG RYKRGLTVDA VSEGTRTSLT DEGPKAVLRE LADGRVIAVT
HRPMAEGGGW VATFEDITER RRNEARIIHM ARHDGLTDLP NRTRLREIGA ERVEALRTGA
DGQLAVLCLD LDRFKPVNDS FGHAVGDALL RAVAGRLRGH VRGHDVVARL GGDEFAVLSH
VEDAAGAMGL AERLIEIVAA PYRLDGITVE IGMSVGIALA GAEDDLPRDI ECLLKEADIA
LYEAKTGGRG TARLFEPQMD ATLRERLGLE RELREALAQS RFELHYQPLV DLSDNRITGM
EALVRWRHPE RGLVNPAVFI PLAEETGLIV PIGEWVLSQA CRDAAAWPDA ISVAVNVSPL
QLRNRGFVQS VLGALATSGL KASRLELEIT ESVLLDDTEV NLETLHSLRR LGVRISMDDF
GTGYSSISYL RRFPFDKIKI DRSFVPDSAG QSDAGAIIRA IVSLGASLGI TTLVEGVETE
PQLATIRAEG AQEVQGYLFS PPRPVHEIAV LLEAGIASGV GKAANPPEIP ARTLAA
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