Gene Mpop_4323 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagMpop_4323 
Symbol 
ID6309619 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameMethylobacterium populi BJ001 
KingdomBacteria 
Replicon accessionNC_010725 
Strand
Start bp4607364 
End bp4609514 
Gene Length2151 bp 
Protein Length716 aa 
Translation table11 
GC content71% 
IMG OID642653008 
Productdiguanylate cyclase/phosphodiesterase with PAS/PAC sensor(s) 
Protein accessionYP_001926964 
Protein GI188583519 
COG category[T] Signal transduction mechanisms 
COG ID[COG5001] Predicted signal transduction protein containing a membrane domain, an EAL and a GGDEF domain 
TIGRFAM ID[TIGR00229] PAS domain S-box
[TIGR00254] diguanylate cyclase (GGDEF) domain 


Plasmid Coverage information

Num covering plasmid clones
Plasmid unclonability p-value0.398035 
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones31 
Fosmid unclonability p-value
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGTCCTACG GGGAAGCCAT GCCCTTGAAC GATTTCGAAG CGTTGGCGCG AATCGCCTTC 
GATTGGCTCT GGGTCACCGA TGCCGAGGAT CGATTCAGCT ACATCTCTCC GGGCGCCGAG
CCGATGCTGG GCCGCCCGCC CACGAGCCTG ATCGGCACCC AGCGATCGGC CATGATCTGC
GAGGCGGCGG GCGCGAGCCT GGCCACCTAT CGCGAGACGA TCGCCGCCCG CCGCCCGTTC
CGCGAACTGA CCTACGTCTA CCGGCATCCC GACGGCACGC CGCGCTGGTT CGAGATCAGC
GGGCGCCCGC ATTTCTCGGC CGAGGGCACG TTCCTGGGCT ACCAGGGGGT CGGCAGCGAC
GTCACCGAGC AGCACCGGAC CCGCCTCGCC CTCGTCGAGG CGCATGCCGA ACTCAGCGAG
CAGAACCGGC GCTTCGACGC GGCGCTGGAG AACATGACCC ACGGCCTGTG CATGTTCGAT
GCGGAGCAGC GGCTGCTGGT GTGGAACCGG CGCTACTTGG AGATCTTCGG CCTGCCCGAG
GGCGCGCTCC ATGTCGGCAT GGGCCAGCGC GCCATCATCG AGGTGCTGGT GGCGCTCGGG
CGCTACAAGC GCGGGCTGAC CGTCGATGCG GTGAGCGAGG GCACCCGCAC GTCGCTGACC
GACGAGGGGC CGAAGGCGGT GCTGCGCGAA CTCGCCGACG GGCGGGTCAT CGCCGTGACC
CACCGGCCCA TGGCCGAGGG CGGCGGCTGG GTGGCGACCT TCGAGGACAT CACCGAACGG
CGGCGCAACG AGGCGCGCAT CATCCACATG GCCCGCCACG ACGGGCTCAC CGACCTGCCC
AACCGCACCC GCCTGCGCGA GATCGGGGCC GAGCGGGTCG AGGCGCTGCG GACGGGCGCG
GACGGGCAGC TCGCCGTGCT CTGCCTCGAC CTCGACCGGT TCAAGCCGGT CAACGACAGC
TTCGGCCACG CGGTGGGCGA TGCCCTGCTG CGGGCGGTGG CCGGGCGGCT GCGGGGGCAT
GTGCGCGGAC ACGACGTGGT CGCCCGGCTC GGCGGCGACG AGTTCGCGGT GCTCTCCCAC
GTCGAGGACG CGGCCGGGGC CATGGGGCTG GCCGAGCGCC TGATCGAGAT CGTCGCCGCG
CCCTACCGCC TCGACGGGAT CACCGTCGAG ATCGGGATGA GCGTCGGCAT CGCTCTGGCA
GGGGCCGAGG ACGACCTCCC GCGGGACATC GAATGCCTCC TCAAGGAGGC CGACATCGCC
CTCTACGAGG CCAAGACGGG CGGGCGCGGC ACCGCCCGCC TGTTCGAGCC GCAGATGGAC
GCGACCCTGC GTGAGCGGCT CGGCCTCGAA CGCGAACTGC GCGAGGCGCT GGCGCAGAGC
CGGTTCGAAC TGCACTACCA GCCCCTCGTG GATCTCTCCG ATAACCGCAT CACCGGCATG
GAGGCGCTGG TGCGCTGGCG CCATCCCGAG CGCGGCCTCG TGAACCCGGC GGTGTTCATC
CCGCTGGCGG AGGAGACCGG CCTGATCGTG CCGATCGGCG AGTGGGTGCT GAGCCAGGCC
TGCCGCGACG CCGCCGCCTG GCCGGACGCG ATCAGCGTGG CGGTCAACGT CTCGCCGCTG
CAGCTGCGCA ACCGCGGCTT CGTTCAGAGC GTGCTCGGCG CGCTGGCGAC CAGCGGCCTC
AAGGCGAGCC GGCTGGAACT GGAGATCACC GAGAGCGTGC TGCTCGACGA CACCGAGGTG
AACCTCGAGA CGCTGCACAG CCTGCGCCGG CTCGGGGTGC GCATCTCCAT GGACGATTTC
GGCACCGGTT ATTCCTCGAT CAGCTATCTG CGCCGCTTCC CCTTCGACAA GATCAAGATC
GACCGCTCCT TCGTGCCCGA CTCCGCCGGG CAGTCGGATG CCGGCGCGAT CATCCGCGCC
ATCGTCAGCC TCGGAGCGAG TCTCGGCATC ACCACGCTGG TCGAGGGCGT CGAGACCGAG
CCGCAGCTCG CCACCATCCG CGCGGAGGGG GCGCAGGAGG TGCAGGGCTA CCTGTTTAGC
CCGCCCCGGC CCGTCCACGA GATCGCGGTC CTGCTCGAAG CCGGGATCGC CTCCGGGGTC
GGCAAGGCGG CCAATCCGCC GGAAATCCCG GCCCGGACGC TGGCGGCCTG A
 
Protein sequence
MSYGEAMPLN DFEALARIAF DWLWVTDAED RFSYISPGAE PMLGRPPTSL IGTQRSAMIC 
EAAGASLATY RETIAARRPF RELTYVYRHP DGTPRWFEIS GRPHFSAEGT FLGYQGVGSD
VTEQHRTRLA LVEAHAELSE QNRRFDAALE NMTHGLCMFD AEQRLLVWNR RYLEIFGLPE
GALHVGMGQR AIIEVLVALG RYKRGLTVDA VSEGTRTSLT DEGPKAVLRE LADGRVIAVT
HRPMAEGGGW VATFEDITER RRNEARIIHM ARHDGLTDLP NRTRLREIGA ERVEALRTGA
DGQLAVLCLD LDRFKPVNDS FGHAVGDALL RAVAGRLRGH VRGHDVVARL GGDEFAVLSH
VEDAAGAMGL AERLIEIVAA PYRLDGITVE IGMSVGIALA GAEDDLPRDI ECLLKEADIA
LYEAKTGGRG TARLFEPQMD ATLRERLGLE RELREALAQS RFELHYQPLV DLSDNRITGM
EALVRWRHPE RGLVNPAVFI PLAEETGLIV PIGEWVLSQA CRDAAAWPDA ISVAVNVSPL
QLRNRGFVQS VLGALATSGL KASRLELEIT ESVLLDDTEV NLETLHSLRR LGVRISMDDF
GTGYSSISYL RRFPFDKIKI DRSFVPDSAG QSDAGAIIRA IVSLGASLGI TTLVEGVETE
PQLATIRAEG AQEVQGYLFS PPRPVHEIAV LLEAGIASGV GKAANPPEIP ARTLAA