| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Mpop_4278 |
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| Symbol | sdhA |
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| ID | 6313823 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Methylobacterium populi BJ001 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_010725 |
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| Strand | + |
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| Start bp | 4563711 |
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| End bp | 4565528 |
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| Gene Length | 1818 bp |
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| Protein Length | 605 aa |
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| Translation table | 11 |
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| GC content | 68% |
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| IMG OID | 642652963 |
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| Product | succinate dehydrogenase flavoprotein subunit |
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| Protein accession | YP_001926919 |
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| Protein GI | 188583474 |
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| COG category | [C] Energy production and conversion |
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| COG ID | [COG1053] Succinate dehydrogenase/fumarate reductase, flavoprotein subunit |
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| TIGRFAM ID | [TIGR01812] succinate dehydrogenase or fumarate reductase, flavoprotein subunitGram-negative/mitochondrial subgroup
[TIGR01816] succinate dehydrogenase, flavoprotein subunit, E. coli/mitochondrial subgroup |
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Plasmid Coverage information |
| Num covering plasmid clones | 9 |
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| Plasmid unclonability p-value | 1 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | 28 |
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| Fosmid unclonability p-value | 0.954448 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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Sequence |
| Gene sequence | ATGGTCTCCA ACGGATCGAA CGGCGGCACT CCCGCCTACG CCATCACCGA CCACACCTTC
GACGTGGTGA TCGTCGGCGC CGGCGGCGCG GGCCTGCGCG CCACGGTCGG CTGCTCGCAA
GCCGGCCTCC GCACCGCCTG CATCACCAAG GTCTTCCCCA CCCGCTCGCA CACCGTTGCG
GCGCAGGGCG GCATCTCGGC CTCGCTCGGC AATATGGGCC CGGACGACTG GCGCTGGCAC
ATGTACGACA CCGTGAAGGG CTCGGACTGG CTCGGCGACC AGGACGCGAT CGAGTACCTC
GTGCGCAACG CGCCCGCCGC CGTCTACGAG CTGGAGCATT GGGGCGTCCC GTTCTCGCGG
ACGGAGGAAG GCAAGATCTA CCAGCGGCCC TTCGGCGGCA TGACCACCGA TTACGGCAAG
GGCACCGCGC AGCGCACCTG CGCCGCAGCG GACCGCACCG GCCACGCCAT GCTCCACACG
CTCTACGGGC AGGCGGTGAA GAACAAGACC CAGTTCTTCA TCGAGTACTT CGCCCTCGAT
CTGATCATGG ACGAGGACGG ACGCTGCCGC GGCGTCATCG CCATCGATCA GGCCACCGGC
GAGATCCACC GCTTCCGCGC CCAGCAGACG ATCCTGGCCA CCGGCGGCTA CGGCCGCGCC
TACTTCTCAG CGACCTCGGC CCATACCTGC ACCGGCGACG GCAACGCCAT GGTGCTGCGC
GCCGGCCTGC CGCTGCAGGA CATGGAGTTC GTGCAGTTCC ACCCGACCGG CATCTACGGC
GCCGGCTGCC TCATCACCGA AGGGGCGCGG GGCGAGGGCG GCTACCTGAC GAATTCCGAG
GGCGAGCGCT TCATGGAGCG CTACGCGCCG TCGGCCAAGG ATCTCGCCTC CCGCGACGTG
GTCTCCCGCT CGATGACCAT GGAGATCCGC GACGGCCGCG GCGTCGGCAA GGACGGGGAC
CACATCTTCC TGCACCTCGA CCATCTCGAC CCGAAGATCC TGCACGAGCG CCTGCCCGGC
ATCTCGGAGA GCGCGAAGAT CTTCGCGGGC GTGGACGTGA CCAAGGAGCC GATCCCGGTC
CTGCCGACGG TCCATTACAA CATGGGCGGC ATCCCGACGA ACTTCCACGG CGAGGTTCTG
ACCCTCAAGA ACGGCGACCC CGACACCGTC GTGCCGGGCC TGATGGCGCT GGGCGAGGCG
GCCTGCGTCT CGGTGCACGG CGCCAACCGC CTCGGCTCGA ACTCGCTGAT CGACCTCGTG
GTGTTCGGCC GCGCCGCGGG CCTGCGCTGC GCCGACATCG TCGAGGCCGA TGCCCGCCAG
CCGGAACTGC CGAAGGACTC GGCCGACAAG GCGCTCGCGC GCCTCGACCG CTTCCGCTAC
GCCGACGGCG CCACCCCGAC CGCGCAGCTG CGCGACCGGA TGCAGCGGAC GATGCAGAAC
AACTGTGCGG TCTTCCGCAC CGGCGAGGTG CTGGAGGAGG GCAAGGGTCT GATCCACGAC
GTCTGGCGCG GCGTCTCGGA CATCAAGATC ACCGACCGCT CGCTCGTTTG GAACACCGAC
CTGCTCGAGA CGCTCGAATT CGACAATCTG ATCGGCCAGG CGGTCGTGAC GATGGAATCG
GCGGTCAACC GCAAGGAGAG CCGCGGGGCG CATGCCCGCG AGGACTTCCC CGACCGCGAC
GACAAGGAGT GGATGAAGCA CACCCTGGCG TGGCTCGATC AGTCCAAGCA CGGCGTCGAG
ATCGATTACC GTCCGGTCCA CACCTACACC ATGTCGAACG ACATCCAGTA CATCGAGCCG
AAGGCGCGGG TGTACTGA
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| Protein sequence | MVSNGSNGGT PAYAITDHTF DVVIVGAGGA GLRATVGCSQ AGLRTACITK VFPTRSHTVA
AQGGISASLG NMGPDDWRWH MYDTVKGSDW LGDQDAIEYL VRNAPAAVYE LEHWGVPFSR
TEEGKIYQRP FGGMTTDYGK GTAQRTCAAA DRTGHAMLHT LYGQAVKNKT QFFIEYFALD
LIMDEDGRCR GVIAIDQATG EIHRFRAQQT ILATGGYGRA YFSATSAHTC TGDGNAMVLR
AGLPLQDMEF VQFHPTGIYG AGCLITEGAR GEGGYLTNSE GERFMERYAP SAKDLASRDV
VSRSMTMEIR DGRGVGKDGD HIFLHLDHLD PKILHERLPG ISESAKIFAG VDVTKEPIPV
LPTVHYNMGG IPTNFHGEVL TLKNGDPDTV VPGLMALGEA ACVSVHGANR LGSNSLIDLV
VFGRAAGLRC ADIVEADARQ PELPKDSADK ALARLDRFRY ADGATPTAQL RDRMQRTMQN
NCAVFRTGEV LEEGKGLIHD VWRGVSDIKI TDRSLVWNTD LLETLEFDNL IGQAVVTMES
AVNRKESRGA HAREDFPDRD DKEWMKHTLA WLDQSKHGVE IDYRPVHTYT MSNDIQYIEP
KARVY
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