Gene Mpop_4202 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagMpop_4202 
Symbol 
ID6311583 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameMethylobacterium populi BJ001 
KingdomBacteria 
Replicon accessionNC_010725 
Strand
Start bp4492721 
End bp4494493 
Gene Length1773 bp 
Protein Length590 aa 
Translation table11 
GC content66% 
IMG OID642652891 
ProductGluconate 2-dehydrogenase (acceptor) 
Protein accessionYP_001926849 
Protein GI188583404 
COG category[E] Amino acid transport and metabolism 
COG ID[COG2303] Choline dehydrogenase and related flavoproteins 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones
Plasmid unclonability p-value0.494803 
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones39 
Fosmid unclonability p-value
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGGCCAACG TTCATCCCAA AGTTGATGCC GTGATCGTCG GGCTCGGCTG GTGCGGCTCG 
CTTATGGCCG AGGAACTCAC CCGGGCCGGC CTCAACGTCG TCGCCATCGA GCGGGGTCCC
TGGGTCGAGA CGGCGGTCGA CTTTCCGCCC TCCGTCGACA TGGACGAGCT GCGCTGGGAC
ACGCGGCGGG CGATGCTGCT GCCGCCGGCC ATCGAGACCA TCACCTTCCG CAACGACCCG
ACCCAGAAGG CGCTGCCCGC GCGGGACTGG CACTTCAACG AGTGGGGCTA CAATGTCGGC
GGGTCGGGCA CCCATTGGGC CGGCATGGCG TGGCGCTTCC TGCCGTTCGA CTTCCAGCCC
TACAGCATGA CCGTCGAGCG CTACGGCGCC GCGCAGTTCG TCGACGGCCT GATCGTGCAG
GATTGGGGCG TGACCTACGA CGACCTCGAA CCGTTCTACG ACCGGTTCGA GAAGATCGCC
GGCGTCTCCG GCAAGGCCGG CAATCTCAGG GGCGAAAAGA TCCCCGGCGG CAACATCTTC
GAGGGCGCGC GCTCGGACGA GTATCCGTTG CCGCCGCTCA AGACGACCCG CCTGACCGAC
CTCTTCTGCG AGGCCTCGGC CAGCCTCGGC TACCACCCCT TCATGGTCCC GGCGGGCCAG
ACCTCGGCGG CCTACACGAA CCCGCTCGGC GTCCGGATGG GGCCCTGCAC CTATTGCGGC
TACTGCATGT ATTACGGCTG CGGCAACTGG TCGAAATCGA CGCCCAACAA CTGCGTCGTC
CCGGTGCTGA TGCAGCGCAA GAACTTCAGC GTCCTGACCG AGTCCACGGT CCTGCGCGCC
AACCTCGCCC CGGACGGGAA GACCGCAACC GGCGTGACCT ACGTCGACAA GGATAACAAG
ACCTGGGAGC AGCCGGCCGA CATCGTCGTC TTCTCCGCGT TCCAGATGCA GAACGTGCGG
CTGATGCTGC TCTCGAAGAT CGGCAAGCCC TACGACCACG CGACCGGGGA AGGCGTCGTC
GGCCGGGCCT ACAGCTTCCA GACCGTCTCC GGCGCGAACA TCTTCTTCGA GAACGAGTAC
CTCAACCAGT TCATCGGCGC CGGCGCTCTC TCGGCCCAGA TCGACGACTT CAACGGCGAC
AACTTCGACC ATACCGGCAT GGACTTCATC GGCGGCGCGG GCATCCTCGT GGTCTCCCGC
GGCGCCCGCC CGATCGGCAA TGCCGACTTC CTTCCCCCGG GAACGCCCCG CTGGGGCAGC
GAATGGAAGA AGGCCTACAC CCACAGCTTC CAGAACGGGA CCTTCATCTT CGGCCAGGGT
ACGAGCTTCG CGCACAAGGA CGCCTATCTC GACCTCGATC CCGAGTACAA GGACATCCAC
GGCCTCCCGC TGCTGCGGCT CACCTACGAC TACAACGAGA ACGACCGCCG CTCGGCGAAG
CTGATCGAGG ACAAGAGCGT CGAGATCGGC AAGAAGATGG GGGCGAAGCT CGTCGTCGCC
ACGAACGCGA CCAACCAGCA CGCCTCGCCC TACCAGCTCG CCAGCGACCA CACCAACGGC
GGCGCGGTGA TGGGGCTCGA CCCGAAGACC AGCGCGCTGA ACCGCTTCCA GCAGAGCTGG
GACGTTCACA ACGTCTTCGT CCTCGGCGCC TCGTCCTTTC CCAACAACGC CGGCTACAAC
CCGACCGGAA CGGTCGGCGC CCTGACGCTC TGGACTGCGA AAGCGATCAT CGAGACGTAT
CTCGACAAGC GCGGTCCGCT GGTGGCGAAT TGA
 
Protein sequence
MANVHPKVDA VIVGLGWCGS LMAEELTRAG LNVVAIERGP WVETAVDFPP SVDMDELRWD 
TRRAMLLPPA IETITFRNDP TQKALPARDW HFNEWGYNVG GSGTHWAGMA WRFLPFDFQP
YSMTVERYGA AQFVDGLIVQ DWGVTYDDLE PFYDRFEKIA GVSGKAGNLR GEKIPGGNIF
EGARSDEYPL PPLKTTRLTD LFCEASASLG YHPFMVPAGQ TSAAYTNPLG VRMGPCTYCG
YCMYYGCGNW SKSTPNNCVV PVLMQRKNFS VLTESTVLRA NLAPDGKTAT GVTYVDKDNK
TWEQPADIVV FSAFQMQNVR LMLLSKIGKP YDHATGEGVV GRAYSFQTVS GANIFFENEY
LNQFIGAGAL SAQIDDFNGD NFDHTGMDFI GGAGILVVSR GARPIGNADF LPPGTPRWGS
EWKKAYTHSF QNGTFIFGQG TSFAHKDAYL DLDPEYKDIH GLPLLRLTYD YNENDRRSAK
LIEDKSVEIG KKMGAKLVVA TNATNQHASP YQLASDHTNG GAVMGLDPKT SALNRFQQSW
DVHNVFVLGA SSFPNNAGYN PTGTVGALTL WTAKAIIETY LDKRGPLVAN