Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | Mpop_4196 |
Symbol | |
ID | 6311607 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Methylobacterium populi BJ001 |
Kingdom | Bacteria |
Replicon accession | NC_010725 |
Strand | + |
Start bp | 4484124 |
End bp | 4486205 |
Gene Length | 2082 bp |
Protein Length | 693 aa |
Translation table | 11 |
GC content | 71% |
IMG OID | 642652885 |
Product | integral membrane sensor hybrid histidine kinase |
Protein accession | YP_001926843 |
Protein GI | 188583398 |
COG category | [T] Signal transduction mechanisms |
COG ID | [COG2204] Response regulator containing CheY-like receiver, AAA-type ATPase, and DNA-binding domains [COG4191] Signal transduction histidine kinase regulating C4-dicarboxylate transport system |
TIGRFAM ID | |
|
|
Plasmid Coverage information |
Num covering plasmid clones | 6 |
Plasmid unclonability p-value | 1 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
| |
Fosmid Coverage information |
Num covering fosmid clones | 41 |
Fosmid unclonability p-value | 1 |
Fosmid Hitchhiker | No |
Fosmid clonability | normal |
| |
Sequence |
Gene sequence | TTGATCGCGC GGGCGAGCGG CGGCGGCGGC CTCGCGGCCG CCCTGACCGT CCTGTCCGGC TGGGCCTTCG ACGTGCCGAT CCTGAGGCGC ATCGTCCCCG GTCAGCCGCC GATGGTCGTC CTGACCGCCA TCGGCATCTT GATGCTTGCG ACGGCGCTCC TGCTCGGCAC GGGCTCCGGC GCATCCCGCC CGGTCCGCCG GGCAGGCCGA TGGATCGCCG CAGCCGCCGC GGCCGTCGGC ATCGGGGGGA TCCTGCAATA CCTCCTGCCG CTGCCGGTCC GCCTCGACGA CTGGGTCCAG CGTCTCGCCT TCGGACCTCT GAAGCCCGGG AGCGGCATGG CCCTGGCGAC GGCTGCGAGC ATCGCGGCCG TCGCGGTTGG TCTCCTCTTC CAGGACGCGC CGAGGCGCTG GCTGCGCGAC CTCGGCACGC TCGCAACCCT CTGGGGTTTC GTCATCGCGG CCGCGGGCGT TCTCGGCTAC GCTTACGGGC TCGGCGCCCT GCATCAGGCC GGCCCGTTCT CGCGCATGGC GCTCGTGACC GCGGTCACCC TGGGCGTCCT TGCCGTCGGC GCGCTGTTCA GCCGCCCGAC CCGGCCCTGG ATCGCACCGG TGCTCTGCGC CGGCGAAGCA GGGTCCCCGA CGCGCCACCT GCTTCCCGCC GTCGTGGTGG CGCCGCTGGT CCTGGGCTGG CTGCAACTCC AGGCCGTCCG CTCCGACCTG ATCGAGGCCG AGACCGGCAC GGCCCTGCTC ATGGCCGTCC TCACCCTCTG GCTGGCCGCG TTGGTCGTCC GTGTCGCACG CAACATCGAC CGACGCGCGG TCGCGGAGCG GCGGCTCCGG GAGACGCTGC ACGGCATGAA CGAGGCCCTG GAGCGGCGCG TGGCGGCGCG CACGCAGGAA CTCGCCGAGG CGCAGGACGC TCTGGTGCAG GCGCAGAAGA TGGAGGCCAT CGGCCAATTG ACCGGGGGCG TGGCGCACGA CTTCAACAAC CTGCTGACCA TCATCCGGTC CTCGACCGAC TTCCTGCGCC GGCCGGACCT GCCGGAGGAG CGTCGGCGCC GTTACCTCGA CGCCGTCTCG GACACGGTGG AGCGGGCCGC GAAGCTGACC GCGCAACTGC TCGCCTTCGC ACGGCGCCAG GCGCTCAAGC CCGCGGTGTT CGACGCCGGC GAGCGCATCC GCGGCATCGC CCAGATGCTC GACTCACTCA CAGGCGCCCG CATCCGGATC GTGACGACCC TGGCCGAGGG CCCATGCGCG GTGCGCGCCG ACCCGGTGCA GTTCGAAACC GCGCTGGTGA ACCTCGCGGT GAACGCGCGC GACGCCATGA ACGGCGAGGG GACGCTCACC ATCGAGCTGA CCTGCGGGCG ACCCAAGCCC TCGATCCGCG GCCACGCGGG CTCGCCGAGC CCCTTCGTGG CGGTCTCGGT CTCGGATACC GGATCGGGGA TCGTGAAGGA GCAGCTCACC CGCATCTTCG AGCCGTTCTT CACGACCAAG GAGGTGGGGA AGGGCACCGG GTTGGGATTG AGCCAAGTGA TCGGCTTTGC CAAGCAATCG GGCGGCGACG TCGACGTTGC CAGCGTGGTG GGCCGAGGAA GCACCTTCAC GCTCTACCTG CCCCAGGCCG AGGCCGGAAT CGGCGGGGAG AAACCCGCCC CCGAACCGGA GGGACAGGCG CTGGAGGACG GCGACCAATG CATCCTGGTG GTCGAGGACA ACGTGGAGAT CGGCCGGTTC TGCACGCAGA TCTTGCACGA CCTCGGCTAC AGCACGGTGC TGACCCAGAC GGCGGAGGCG GCGCTCGCCG AGATCGAGGC GGTGCCGTTC CGCTTCGACG CGGTCTTCTC GGACGTGGTG ATGCCGGGCA TGGGTGGGAT CGAGCTGGCC AAGCGGCTGC GCGCGCTGCA CCCGGAGATG CCGGTGGTCC TGACCTCCGG CTACAGCCAC GTGCTGGCGG GCAACGACGC GCACGGCTTC GAGTTCGTGC GCAAGCCCTA CTCGGCCGAG GAAGTCCGCA AGGTCCTGCG TGAGGCCGTG GCTGCCAAGC CGAAGGTCCG CCCGGCCCCG ACGGAGACCT AG
|
Protein sequence | MIARASGGGG LAAALTVLSG WAFDVPILRR IVPGQPPMVV LTAIGILMLA TALLLGTGSG ASRPVRRAGR WIAAAAAAVG IGGILQYLLP LPVRLDDWVQ RLAFGPLKPG SGMALATAAS IAAVAVGLLF QDAPRRWLRD LGTLATLWGF VIAAAGVLGY AYGLGALHQA GPFSRMALVT AVTLGVLAVG ALFSRPTRPW IAPVLCAGEA GSPTRHLLPA VVVAPLVLGW LQLQAVRSDL IEAETGTALL MAVLTLWLAA LVVRVARNID RRAVAERRLR ETLHGMNEAL ERRVAARTQE LAEAQDALVQ AQKMEAIGQL TGGVAHDFNN LLTIIRSSTD FLRRPDLPEE RRRRYLDAVS DTVERAAKLT AQLLAFARRQ ALKPAVFDAG ERIRGIAQML DSLTGARIRI VTTLAEGPCA VRADPVQFET ALVNLAVNAR DAMNGEGTLT IELTCGRPKP SIRGHAGSPS PFVAVSVSDT GSGIVKEQLT RIFEPFFTTK EVGKGTGLGL SQVIGFAKQS GGDVDVASVV GRGSTFTLYL PQAEAGIGGE KPAPEPEGQA LEDGDQCILV VEDNVEIGRF CTQILHDLGY STVLTQTAEA ALAEIEAVPF RFDAVFSDVV MPGMGGIELA KRLRALHPEM PVVLTSGYSH VLAGNDAHGF EFVRKPYSAE EVRKVLREAV AAKPKVRPAP TET
|
| |