Gene Mpop_4180 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagMpop_4180 
Symbol 
ID6311611 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameMethylobacterium populi BJ001 
KingdomBacteria 
Replicon accessionNC_010725 
Strand+ 
Start bp4466445 
End bp4467059 
Gene Length615 bp 
Protein Length204 aa 
Translation table11 
GC content69% 
IMG OID642652869 
Producttranscriptional regulator, TetR family 
Protein accessionYP_001926827 
Protein GI188583382 
COG category[K] Transcription 
COG ID[COG1309] Transcriptional regulator 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones6 
Plasmid unclonability p-value0.0804485 
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones34 
Fosmid unclonability p-value1 
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGGCGATGG GGCGGCCCCG GTCGTTCGAC ACGGACAAGG CCCTTGATGA TGCGATGGAG 
GTGTTCTGGC GCCACGGCTA TGACGGCGCG AGCCTCGCGA TGCTGACCAA GGCGATGGGT 
ATCAAGCCGC CGAGCCTCTA CGCGGCCTTC GGCAGCAAGG AGGGTCTGCT GAAGGCGGCT 
CTCGACCGCT ACGCCCAGCG TCGGTCCGAG CACATGCGCT ACGTGCTTGC GGGCCCCACC 
GCCCGCGACG TGGCCGAGCG CTTCCTGTTC AGCATCGCGG AGAGTCACAC CGACCCGGCC 
AACCCGCCCG GCTGCCTCCT CGTCCAGGGC GGGCTCGCCT GCGGCCAAGG CTCGGAGAAC 
ATTCCGTTCG AGCTGGCGTC TCGGCGCGCG CTGTCGGAGA CGGAACTGCG CGAGCGCTTC 
GTTCAGGCGC AACAGGACGG CGACCTTGCC GAGACCGCCG ATCCTGCAGC ACTGGCGCGG 
TTTCTCTCAA CGGTCGCCTC GGGCATGGGT GTCCTGGCGT CGTCCGGAGC GGATCGGGGC 
GCCTTGCGGG AGGTCGCGCG CGTCTCGCTC AGCGCCTTCC CGGGACGCGA CGAGATGCGG 
ATCGTGAAGC CGTGA
 
Protein sequence
MAMGRPRSFD TDKALDDAME VFWRHGYDGA SLAMLTKAMG IKPPSLYAAF GSKEGLLKAA 
LDRYAQRRSE HMRYVLAGPT ARDVAERFLF SIAESHTDPA NPPGCLLVQG GLACGQGSEN 
IPFELASRRA LSETELRERF VQAQQDGDLA ETADPAALAR FLSTVASGMG VLASSGADRG 
ALREVARVSL SAFPGRDEMR IVKP