| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Mpop_4157 |
|---|
| Symbol | |
|---|
| ID | 6311655 |
|---|
| Type | CDS |
|---|
| Is gene spliced | No |
|---|
| Is pseudo gene | No |
|---|
| Organism name | Methylobacterium populi BJ001 |
|---|
| Kingdom | Bacteria |
|---|
| Replicon accession | NC_010725 |
|---|
| Strand | + |
|---|
| Start bp | 4441036 |
|---|
| End bp | 4441506 |
|---|
| Gene Length | 471 bp |
|---|
| Protein Length | 156 aa |
|---|
| Translation table | 11 |
|---|
| GC content | 66% |
|---|
| IMG OID | 642652849 |
|---|
| Product | sulfur oxidation protein SoxY |
|---|
| Protein accession | YP_001926807 |
|---|
| Protein GI | 188583362 |
|---|
| COG category | [S] Function unknown |
|---|
| COG ID | [COG5501] Predicted secreted protein |
|---|
| TIGRFAM ID | |
|---|
| 
|
Plasmid Coverage information |
| Num covering plasmid clones | 15 |
|---|
| Plasmid unclonability p-value | 1 |
|---|
| Plasmid hitchhiking | No |
|---|
| Plasmid clonability | normal |
|---|
| |
Fosmid Coverage information |
| Num covering fosmid clones | 42 |
|---|
| Fosmid unclonability p-value | 1 |
|---|
| Fosmid Hitchhiker | No |
|---|
| Fosmid clonability | normal |
|---|
| |
Sequence |
| Gene sequence | ATGACCTCTG CCAAGATCCC CGCATTGAAC CGCCGCCAAG CCCTGGCCTT CGGCACCGGA
GCCGTCGTGG CAACCGCCTT CGCCTTCCGC GCTGGACCGG CCCTGGCCGC GAAGCCTGCG
ACCGATGAGG CCATCAAGGC CTTCACCCGC GGCAAGGAGC CCGTGAGGGG CAAGGTCAAG
CTCGAACTCC CCGAGATCGC CGAGAACGGC AACACCGTAC CGATGACGGT GAGCGTCGAC
GTGCCGATGA CGCCGGAGAG CTATGTCGAG GAGGTGATGA TCGTTGCCGA GGGCAATCCG
AACCCCGGCG TCATCAGCTT CCACTTCACG CCGTCGAGCG TCGCCGAGGC GAACACGCGC
ATCCGTCTTG CCGAGACGCA GAACGTCATC GCGGTCGCCC GCATGAACGA CGGCTCGGTC
TTCAGCGACG TCCGCCAGGT GAAGGTCACC ATCGGCGGCT GCGGCGGCTA A
|
|---|
| Protein sequence | MTSAKIPALN RRQALAFGTG AVVATAFAFR AGPALAAKPA TDEAIKAFTR GKEPVRGKVK
LELPEIAENG NTVPMTVSVD VPMTPESYVE EVMIVAEGNP NPGVISFHFT PSSVAEANTR
IRLAETQNVI AVARMNDGSV FSDVRQVKVT IGGCGG
|
|---|
| |