Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | Mpop_4106 |
Symbol | |
ID | 6311814 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Methylobacterium populi BJ001 |
Kingdom | Bacteria |
Replicon accession | NC_010725 |
Strand | - |
Start bp | 4384741 |
End bp | 4386102 |
Gene Length | 1362 bp |
Protein Length | 453 aa |
Translation table | 11 |
GC content | 68% |
IMG OID | 642652799 |
Product | signal transduction histidine kinase |
Protein accession | YP_001926757 |
Protein GI | 188583312 |
COG category | [T] Signal transduction mechanisms |
COG ID | [COG3920] Signal transduction histidine kinase |
TIGRFAM ID | [TIGR00229] PAS domain S-box |
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Plasmid Coverage information |
Num covering plasmid clones | 4 |
Plasmid unclonability p-value | 0.0707076 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
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Fosmid Coverage information |
Num covering fosmid clones | 33 |
Fosmid unclonability p-value | 1 |
Fosmid Hitchhiker | No |
Fosmid clonability | normal |
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Sequence |
Gene sequence | ATGGACACGG TAAGCTCGCA AGACATCGTC GACACCGTCC GGACCAGCCT GCTGGTTCTC GACATGGACC TTAGGGTCAA GTCGGCGAAC CGCGCCTTCT ACAACACCTT CAAGGTCGAG CCCGAGGCGA CGGTCGGACG GCCGCTGTTC GAGCTCGGCA ACGGCCAGTG GGGGATCCCC GAACTGCGCA CGCTGCTCGG CGAGATCGTG CCGCGCGACG GGACCGTCGA GGGCTACGAG GTCGGGCACG ACTTTCCCGG CATCGGCGTG AAGTGCATGC GCCTCAACGC CCGCAAGGTG TTCAGGGAGG ACGGCCACGT TCCATACCTG CTCCTCGCCA TCGACGACGT CACGGGCGAG CACGAGGCCC GGGCCGAGGC CGAGCGACAG CGACTTCTCG CCCAGGGCAT CGTCGACACG GTTCGAGACC CGCTGGTGGT CCTCGAAGCC GACATGACAG TGGTCAGTGC CAGCCGCTCC TTCCTGCGCA TGTTCGGCCT CGACGTTGGG ACTGTGGTCG GCACGTCGCT CTACGACCTG TCGCAAGGCC AGTGGCGGGT CGGGCGGCTC CAGGATCTGC TCGGGCGGAT CGTGCCCGAC GACATGGCCA TCGACGGCTT CGAGGTCGAG GACGAGTTCC CGGGACTCGG TCGGCGCATC TTCAAGCTCA ACGCCCGCAA GGTCCACCGT CCCGGCAACC ATATCACTCG GCTGCTCCTG GTCTTCGAGG ACGTGACCGA GGCGCGAATG CTGGAGAGGC ACCGCGACCT TCTCGCCGCC GAGCTCGCCC ATCGCATCAA GAACAGCCTG CAGATCATCA CCTCGTTCGT CTCGTACGAA ATCCGCCGGG CGGCCGAACC CTGCGTCGAG GGCTACCGCG CGATGCAGGG CCGCATCGGC GCCGTGGCCG AGCTCTACGA CGTGATCTCC CGCTCCTCGA CGCTCGGCCC GGTGGCGATG GGGCCATATC TGGAGGGCAT CGCCGGAAGC CTGCGTTCCA GCCTGCTCGG CGCCGAGGCC CGCATCGCCG TCGACGTCGA GGCGGAGCCG CTGTCCATCG TCGCCGACCA GGCGGTCACG GTCGGGTTGA TCGTCAACGA ACTCGCCACC AACGCGGTGA AGTACGCGTT TCCGTCCGGA GGGGGCCGCA TCCTCCTCGG GTTCAGGCGC CGGGACGGTG AGGCGGTGCT CACGGTCGCC GACGACGGCA TCGGGCTGGA CGCGACCAGC GGCCCGGGTT CCGGCCTTGG ATCCCGGTTC GTCGAGGCGT TCGTCCGCCA GCTCAACGGA ACGCTCGCGA TGGCAAGCGG CGCGGGCGGG ACGACCGTGA CGGTAAGGCT GCCGGCCTCC GTCCTGGCGT AG
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Protein sequence | MDTVSSQDIV DTVRTSLLVL DMDLRVKSAN RAFYNTFKVE PEATVGRPLF ELGNGQWGIP ELRTLLGEIV PRDGTVEGYE VGHDFPGIGV KCMRLNARKV FREDGHVPYL LLAIDDVTGE HEARAEAERQ RLLAQGIVDT VRDPLVVLEA DMTVVSASRS FLRMFGLDVG TVVGTSLYDL SQGQWRVGRL QDLLGRIVPD DMAIDGFEVE DEFPGLGRRI FKLNARKVHR PGNHITRLLL VFEDVTEARM LERHRDLLAA ELAHRIKNSL QIITSFVSYE IRRAAEPCVE GYRAMQGRIG AVAELYDVIS RSSTLGPVAM GPYLEGIAGS LRSSLLGAEA RIAVDVEAEP LSIVADQAVT VGLIVNELAT NAVKYAFPSG GGRILLGFRR RDGEAVLTVA DDGIGLDATS GPGSGLGSRF VEAFVRQLNG TLAMASGAGG TTVTVRLPAS VLA
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