Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | Mpop_4082 |
Symbol | |
ID | 6311841 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Methylobacterium populi BJ001 |
Kingdom | Bacteria |
Replicon accession | NC_010725 |
Strand | + |
Start bp | 4356006 |
End bp | 4357379 |
Gene Length | 1374 bp |
Protein Length | 457 aa |
Translation table | 11 |
GC content | 68% |
IMG OID | 642652777 |
Product | efflux transporter, RND family, MFP subunit |
Protein accession | YP_001926735 |
Protein GI | 188583290 |
COG category | [M] Cell wall/membrane/envelope biogenesis |
COG ID | [COG0845] Membrane-fusion protein |
TIGRFAM ID | [TIGR01730] RND family efflux transporter, MFP subunit |
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Plasmid Coverage information |
Num covering plasmid clones | 10 |
Plasmid unclonability p-value | 1 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
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Fosmid Coverage information |
Num covering fosmid clones | 24 |
Fosmid unclonability p-value | 0.279374 |
Fosmid Hitchhiker | No |
Fosmid clonability | normal |
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Sequence |
Gene sequence | ATGCGCATCA TCCTGACCGC CCTCATCCTG GCCGTCGGCG TCCTCGTGGG CGCTGCGGTT CCCGCCGTCT CCGGCTTCGT CCAGGGGCTG TTGATATCGG CTGGCCTGCC GCCGACCGTC TTCAACCTCG CCAGCGGCCC CACCGCCGCG AATTCCGCCG AGGCTTCCCC CGGCGAGGCG GGCCACGCCG CGGGCGACGG ACACGGTCAC GGTCACGGCA AGCCGGCCAG TAAGCCCGGG GCCGAGCAGA CCCAAGGCGA GCATGACCAC TCCGAGGCCG AAGGCGAGGA AGGTCATGTC AAAATGACCG CCGAGCAGAT CGAGAACCAG GACATCAAGG TGGCCAAAGC CGAGGGCGCC ATGCTGTCTC GCCATATCCT GGTGCCCGGT ACGATCACGC CCGACACCGA CCGGATCGCG CGGGTCCCTG CCCGGGTCGT CGGCACCGTC GCCGAGATGC GCAAGCGCCT GGGCGACGCC GTCAAGAAGG ACGAGGTCGT TGCCGTCCTG GATAGCCGCG AGGTCGCGGA CTCCAAGAGC GAGTACCTCA CCGCCTCGGT GAAGGCCGAC CTGGAGAAGA CCAATTTCGA ACGGCAGCAG GCGCTCTGGG ACAAGCGGAT CTCGGCCGAG AGCGCCTTCT TGAATGCCAA GGCGGTCTAT TCCGAGGCGA CGCTGCGCCA GGATCTGGCG CGGCAGAAGC TGTCGGCGCT GGGGCTCGAC GCGACGGCGG TGGCCAAGCT GGCCAAGCGC GACGAGACCA CCCCGAACCT GTCGAGCCTG CGCCAGTACG AACTGCGCTC GCCGATGTCG GGGCGCATCG TCGAGCGAAA GGTCGACGTC GGCACCGCGG TGGGCAAGGA AGGCGACCCT TCCGACCTCT ACACCGTCGC CGACCTCTCA ACGGTGTGGA TCGAACTTGC CGTTCCGACC TCGGAACTCG CCAAGGTCAA GGAAGGCGCG TCCGTCACGG TCGCGCCGGG CCAGGAGGGC GGCGTGCAGC ACGAGAAGGG CAAGGTCGTC TTCGTCAGTC CTTTCCTCAC CGCCGACACG CGTGCCGCCA AGGTCATCGT CGCCCTGCCG AACAAGGACA TGGCCTGGCG TCCGGGCACC TACGTCACCG CCGAGGTCGA GATCTCGCGG GATGCCGTTC CGGTGAGCGT GCCCAAGGCG GCCCTCCAGA CCGTCGAGGG CAAGCGCGTC GTCTTCGTCC GCACAGACGA GGGCTTCGAG AAGCGCGAGG TCGAACTCGG GCGCTCCGAC GACGACGCCT ACGAGGTCGC CTCGGGTCTC AAGCCCGGCG AGGCCATCGC CGTCGGCAAC ACCTTCCTCC TCAAGGCCGA GCTCGGAAAG AGCGAAGCCG ACCACGCGCA TTGA
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Protein sequence | MRIILTALIL AVGVLVGAAV PAVSGFVQGL LISAGLPPTV FNLASGPTAA NSAEASPGEA GHAAGDGHGH GHGKPASKPG AEQTQGEHDH SEAEGEEGHV KMTAEQIENQ DIKVAKAEGA MLSRHILVPG TITPDTDRIA RVPARVVGTV AEMRKRLGDA VKKDEVVAVL DSREVADSKS EYLTASVKAD LEKTNFERQQ ALWDKRISAE SAFLNAKAVY SEATLRQDLA RQKLSALGLD ATAVAKLAKR DETTPNLSSL RQYELRSPMS GRIVERKVDV GTAVGKEGDP SDLYTVADLS TVWIELAVPT SELAKVKEGA SVTVAPGQEG GVQHEKGKVV FVSPFLTADT RAAKVIVALP NKDMAWRPGT YVTAEVEISR DAVPVSVPKA ALQTVEGKRV VFVRTDEGFE KREVELGRSD DDAYEVASGL KPGEAIAVGN TFLLKAELGK SEADHAH
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