Gene Mpop_4082 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagMpop_4082 
Symbol 
ID6311841 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameMethylobacterium populi BJ001 
KingdomBacteria 
Replicon accessionNC_010725 
Strand
Start bp4356006 
End bp4357379 
Gene Length1374 bp 
Protein Length457 aa 
Translation table11 
GC content68% 
IMG OID642652777 
Productefflux transporter, RND family, MFP subunit 
Protein accessionYP_001926735 
Protein GI188583290 
COG category[M] Cell wall/membrane/envelope biogenesis 
COG ID[COG0845] Membrane-fusion protein 
TIGRFAM ID[TIGR01730] RND family efflux transporter, MFP subunit 


Plasmid Coverage information

Num covering plasmid clones10 
Plasmid unclonability p-value
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones24 
Fosmid unclonability p-value0.279374 
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGCGCATCA TCCTGACCGC CCTCATCCTG GCCGTCGGCG TCCTCGTGGG CGCTGCGGTT 
CCCGCCGTCT CCGGCTTCGT CCAGGGGCTG TTGATATCGG CTGGCCTGCC GCCGACCGTC
TTCAACCTCG CCAGCGGCCC CACCGCCGCG AATTCCGCCG AGGCTTCCCC CGGCGAGGCG
GGCCACGCCG CGGGCGACGG ACACGGTCAC GGTCACGGCA AGCCGGCCAG TAAGCCCGGG
GCCGAGCAGA CCCAAGGCGA GCATGACCAC TCCGAGGCCG AAGGCGAGGA AGGTCATGTC
AAAATGACCG CCGAGCAGAT CGAGAACCAG GACATCAAGG TGGCCAAAGC CGAGGGCGCC
ATGCTGTCTC GCCATATCCT GGTGCCCGGT ACGATCACGC CCGACACCGA CCGGATCGCG
CGGGTCCCTG CCCGGGTCGT CGGCACCGTC GCCGAGATGC GCAAGCGCCT GGGCGACGCC
GTCAAGAAGG ACGAGGTCGT TGCCGTCCTG GATAGCCGCG AGGTCGCGGA CTCCAAGAGC
GAGTACCTCA CCGCCTCGGT GAAGGCCGAC CTGGAGAAGA CCAATTTCGA ACGGCAGCAG
GCGCTCTGGG ACAAGCGGAT CTCGGCCGAG AGCGCCTTCT TGAATGCCAA GGCGGTCTAT
TCCGAGGCGA CGCTGCGCCA GGATCTGGCG CGGCAGAAGC TGTCGGCGCT GGGGCTCGAC
GCGACGGCGG TGGCCAAGCT GGCCAAGCGC GACGAGACCA CCCCGAACCT GTCGAGCCTG
CGCCAGTACG AACTGCGCTC GCCGATGTCG GGGCGCATCG TCGAGCGAAA GGTCGACGTC
GGCACCGCGG TGGGCAAGGA AGGCGACCCT TCCGACCTCT ACACCGTCGC CGACCTCTCA
ACGGTGTGGA TCGAACTTGC CGTTCCGACC TCGGAACTCG CCAAGGTCAA GGAAGGCGCG
TCCGTCACGG TCGCGCCGGG CCAGGAGGGC GGCGTGCAGC ACGAGAAGGG CAAGGTCGTC
TTCGTCAGTC CTTTCCTCAC CGCCGACACG CGTGCCGCCA AGGTCATCGT CGCCCTGCCG
AACAAGGACA TGGCCTGGCG TCCGGGCACC TACGTCACCG CCGAGGTCGA GATCTCGCGG
GATGCCGTTC CGGTGAGCGT GCCCAAGGCG GCCCTCCAGA CCGTCGAGGG CAAGCGCGTC
GTCTTCGTCC GCACAGACGA GGGCTTCGAG AAGCGCGAGG TCGAACTCGG GCGCTCCGAC
GACGACGCCT ACGAGGTCGC CTCGGGTCTC AAGCCCGGCG AGGCCATCGC CGTCGGCAAC
ACCTTCCTCC TCAAGGCCGA GCTCGGAAAG AGCGAAGCCG ACCACGCGCA TTGA
 
Protein sequence
MRIILTALIL AVGVLVGAAV PAVSGFVQGL LISAGLPPTV FNLASGPTAA NSAEASPGEA 
GHAAGDGHGH GHGKPASKPG AEQTQGEHDH SEAEGEEGHV KMTAEQIENQ DIKVAKAEGA
MLSRHILVPG TITPDTDRIA RVPARVVGTV AEMRKRLGDA VKKDEVVAVL DSREVADSKS
EYLTASVKAD LEKTNFERQQ ALWDKRISAE SAFLNAKAVY SEATLRQDLA RQKLSALGLD
ATAVAKLAKR DETTPNLSSL RQYELRSPMS GRIVERKVDV GTAVGKEGDP SDLYTVADLS
TVWIELAVPT SELAKVKEGA SVTVAPGQEG GVQHEKGKVV FVSPFLTADT RAAKVIVALP
NKDMAWRPGT YVTAEVEISR DAVPVSVPKA ALQTVEGKRV VFVRTDEGFE KREVELGRSD
DDAYEVASGL KPGEAIAVGN TFLLKAELGK SEADHAH