| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Mpop_4016 |
|---|
| Symbol | |
|---|
| ID | 6312016 |
|---|
| Type | CDS |
|---|
| Is gene spliced | No |
|---|
| Is pseudo gene | No |
|---|
| Organism name | Methylobacterium populi BJ001 |
|---|
| Kingdom | Bacteria |
|---|
| Replicon accession | NC_010725 |
|---|
| Strand | + |
|---|
| Start bp | 4289571 |
|---|
| End bp | 4291358 |
|---|
| Gene Length | 1788 bp |
|---|
| Protein Length | 595 aa |
|---|
| Translation table | 11 |
|---|
| GC content | 74% |
|---|
| IMG OID | 642652714 |
|---|
| Product | IucA/IucC family protein |
|---|
| Protein accession | YP_001926673 |
|---|
| Protein GI | 188583228 |
|---|
| COG category | [Q] Secondary metabolites biosynthesis, transport and catabolism |
|---|
| COG ID | [COG4264] Siderophore synthetase component |
|---|
| TIGRFAM ID | |
|---|
| 
|
Plasmid Coverage information |
| Num covering plasmid clones | 2 |
|---|
| Plasmid unclonability p-value | 0.0306734 |
|---|
| Plasmid hitchhiking | No |
|---|
| Plasmid clonability | normal |
|---|
| |
Fosmid Coverage information |
| Num covering fosmid clones | 24 |
|---|
| Fosmid unclonability p-value | 0.343521 |
|---|
| Fosmid Hitchhiker | No |
|---|
| Fosmid clonability | normal |
|---|
| |
Sequence |
| Gene sequence | ATGCCACCAT CGTCTCAGAC GGTTGCCGAG GCGGCCGCCT TCCGCAGCTT CGCCAACGGG
TATCTGCGCG AGATCGACCC CGGCATCCGC GTCCGCCACG CCCTGGCGGA CGGGCCGCCC
GCGCCGTGCG TGGAATGGAA CCTCCGCAGC CGGCGCCTCG CGATCCGGGC CGAGATCCGG
TCGCCCTCGC TGTGCGGCGC GCAAGGGTTC GGCCGCCTCT GGACCCGCCA CCTGCACGAG
CCGCGCTGGC GGACGGTCGC ACCGATGCGG GCGCTGCAGG AGCTTCTGGC CGAGGCGTAT
TCCCGCGCCG ACGAGGGACG GGGCGAGACC GCCCGCGAGC GCGAGCTGGA ACTGCTCGGG
CGCGTGCTCG ACAGCTACCG CGAGACCGCC CGCCTGCTCG ACCTCGCCGG GCGGCGCAGC
GATGCGGAGA CGGACTTCAT CGCGGGCGAG CGCGCCCTGG TCTTCGGCCA CTGGCTGCAC
CCGACGCCCA AGAGCCGGCA GGGCCTCACG ACCTGGCAGG CCCGCGCCTA CGCGCCGGAG
GAGGGCGGCT CGTTCCGGCT CGACGTGTTC GCTGCCGAGG CGAGCCTCGT CCGCCACGAT
TCCGCGGTGA CCCGCGCCGC CCCCGACCTC GCCCTCGACC TCCTCGGCAC CGATGCCGCC
CGGCTCGACT TGCGCGCGGG GGAGATCGCC CTGCCGATGC ACCCGCTCCA GGCCGAGGCG
CTGATGCTGG AGCCGCATGT CGCCGCACTC GTCGCGGCGG GCCGCGTCCG GCGGCTCGGC
GCCTTCGGCC CCCGCTTCAC CGCGACCTCC TCGCTGCGCA CCGTCTACAC GGCCGAGAGC
CCGTGGATGG CGAAGTTCTC GCTGCCCGTC ACCCTCACCA ACTCGCTGCG GGTGAACCGG
CTCGCCGAAC TCAAGGCCGG CGTCGCCGTG GCCCGGCTGC TCGCCAAGAG CGGCTTCGAG
GCGCGGCATC CGAACTTCCG GATCCTGGCC GACCCGGCCT ATCTCACCCT GCATTGCCCC
GGCCGCGAGG AGAGCGGCTT CGAGACGGTC CTGCGCGAAA ACCCGTTCCG CAACGGGGCG
GAGCGCGGGA TCGCCACCCT GGCGGCGCTG ACCGCCGAGC CGCTGCCCGG CCGCCCCTCG
CAGCTGGAGG CCCTCCTGCG GCAGGTCTGC CCGGGGGAAA CGGCCGACCG TGCGCACGCC
GCGCGCCGGT GGTTCGGGCT CTATCTCGAC TGCATGCTGG AACCGGTGGT CGCGCTCTAC
GACGGGCACG GCATCGCGCT GGAGGCCCAC CAGCAGAACG CGCTGATCGA CGTCGCCTCC
GGCTGGCCGC GGCGCGGCTT CTACCGCGAC AACCAGGGCT TCTACCTCTC CGAGGCCGCC
CGTCCCCGGC TCCTGCGCGA CGCGCCCGAG ACCGGCACCA TCGGCTCGCT CTACTTCGCC
GACGGCGAGA TCCGGCGGCG GCTCGCCTAC TATCTCGTGG TCAATCAGAT CTTCTCCGTC
ATCGCCCGCA TGGGCCATGA CGGGCTGGCG CGCGAAGAAA CCCTCCTCGA CGATCTCGCC
CGCCGCCTGG AAGCGATGGC GCGCCGCCTG ACCGGCGCCG GCCGCGCCTT CGCCCGCTCG
GTGCTGGAGG GTCCGACCCT CTGCACCAAG GCCAACCTGC GGGTGCGCCT GTGCGACCGC
GACGAACTCG CCTCGGGCGA CGGCACCGGC AACTACATCG ACATGCCGAA CCCGCTCAGC
GCGCGTGCGG CGGCTCGCAG CGAGGCCGGC CATGCCCTCG CTTCGTGA
|
|---|
| Protein sequence | MPPSSQTVAE AAAFRSFANG YLREIDPGIR VRHALADGPP APCVEWNLRS RRLAIRAEIR
SPSLCGAQGF GRLWTRHLHE PRWRTVAPMR ALQELLAEAY SRADEGRGET ARERELELLG
RVLDSYRETA RLLDLAGRRS DAETDFIAGE RALVFGHWLH PTPKSRQGLT TWQARAYAPE
EGGSFRLDVF AAEASLVRHD SAVTRAAPDL ALDLLGTDAA RLDLRAGEIA LPMHPLQAEA
LMLEPHVAAL VAAGRVRRLG AFGPRFTATS SLRTVYTAES PWMAKFSLPV TLTNSLRVNR
LAELKAGVAV ARLLAKSGFE ARHPNFRILA DPAYLTLHCP GREESGFETV LRENPFRNGA
ERGIATLAAL TAEPLPGRPS QLEALLRQVC PGETADRAHA ARRWFGLYLD CMLEPVVALY
DGHGIALEAH QQNALIDVAS GWPRRGFYRD NQGFYLSEAA RPRLLRDAPE TGTIGSLYFA
DGEIRRRLAY YLVVNQIFSV IARMGHDGLA REETLLDDLA RRLEAMARRL TGAGRAFARS
VLEGPTLCTK ANLRVRLCDR DELASGDGTG NYIDMPNPLS ARAAARSEAG HALAS
|
|---|
| |