Gene Mpop_4014 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagMpop_4014 
Symbol 
ID6312014 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameMethylobacterium populi BJ001 
KingdomBacteria 
Replicon accessionNC_010725 
Strand
Start bp4287193 
End bp4288155 
Gene Length963 bp 
Protein Length320 aa 
Translation table11 
GC content75% 
IMG OID642652712 
Productanti-FecI sigma factor, FecR 
Protein accessionYP_001926671 
Protein GI188583226 
COG category[P] Inorganic ion transport and metabolism
[T] Signal transduction mechanisms 
COG ID[COG3712] Fe2+-dicitrate sensor, membrane component 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones17 
Plasmid unclonability p-value
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones24 
Fosmid unclonability p-value0.284425 
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
GTGGCCGGCA GCGACGGGAC GGAGGCCGAC GGGGCCGACA CCGATGACGG TGAGGATCCG 
ATCGAGCGCG CGGCCGCGGC CTGGGTCGCG CGGCTCTCCT CGTCCGATGC CACCGAGGCC
GACCGGAGGG CGTTCGAGGC GTGGCACGCG GCCGATCCGG CCCACGCGGC CGCCTATGCC
GAGATGGATG CGCTGTGGCG CCAGCTCGGT CAGCTCCCCG ATCCCCGCCG CCGTAAGGGG
CCGCCCAAAG GACCCGCGAA GACGCTGGCC GGCCTCGCCG CCCTCGCCCT GATCGGGGGC
GCCCTCGCCG GTCAGGGCGG CCTCCTCGAC CGGCTGCGCG CGGATCTGTG GAGCGGCGTC
GACAGCATCG AGCACGCGAC GCTGCCCGAC GGCAGCCGCG TCGATCTCAA CACGGACACG
GCGATCGCCG TGCGCTTCAC CGCGCAGGAG CGCGGGATCG AGCTTCTGCG CGGCGAGGCC
AGCTTCGATG TCGTGCCCGA TCCGAGCCGG CCGTTCGTGG TACGCGGCGG GGGGGTCAGC
GTGCGCGCCC TCGGAACGCG CTTCTTCCTG CGCGCCGACG GGGCGGACAG CCCGGTCGGG
GTCGTGGAGG GGCGCGTCGA CGTGTCGGCG GAGGGCCGTC ACGCCGTCGT CTCGGCCGGA
GAGGCGGTCC GGATCGGAGA CGACGTCCTG CGGGTCTCGG CGGCAGATGT GGAGCGCGAT
ACGGCGTGGC GCGACGGACG GCTCATCTTC GCCGGAAAGC CGCTGGCGGC GGTCCTGGCG
GAGCTCGACC GCTACCGCCG CGGGCGGATC GTCCTGCTCG ACGCCCGGCT CGGCGAGCGG
CGCGTGACCG GCGCGTTCGA TGCCCGCAAC ACCGACGAGG CGCTCGACGT GATCGCCGCG
ACCATGGGCG CCCGCATCCG GCGGCTCTCG CCCCTGCTGG TGCTGGTCGG CTCACCCCTG
TGA
 
Protein sequence
MAGSDGTEAD GADTDDGEDP IERAAAAWVA RLSSSDATEA DRRAFEAWHA ADPAHAAAYA 
EMDALWRQLG QLPDPRRRKG PPKGPAKTLA GLAALALIGG ALAGQGGLLD RLRADLWSGV
DSIEHATLPD GSRVDLNTDT AIAVRFTAQE RGIELLRGEA SFDVVPDPSR PFVVRGGGVS
VRALGTRFFL RADGADSPVG VVEGRVDVSA EGRHAVVSAG EAVRIGDDVL RVSAADVERD
TAWRDGRLIF AGKPLAAVLA ELDRYRRGRI VLLDARLGER RVTGAFDARN TDEALDVIAA
TMGARIRRLS PLLVLVGSPL