Gene Mpop_3973 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagMpop_3973 
Symbol 
ID6312079 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameMethylobacterium populi BJ001 
KingdomBacteria 
Replicon accessionNC_010725 
Strand
Start bp4240536 
End bp4241879 
Gene Length1344 bp 
Protein Length447 aa 
Translation table11 
GC content69% 
IMG OID642652674 
Producttransposase IS4 family protein 
Protein accessionYP_001926633 
Protein GI188583188 
COG category 
COG ID 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones19 
Plasmid unclonability p-value
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones27 
Fosmid unclonability p-value0.667634 
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGTCCGATC CTACGTGTCT CCCGTTCGCG TTTCCATCCG TTCGGGGCAA GAAGCTCACA 
GCCGCCTTCG ACGGCGGACG CCTGACCTCG GATGGCGGCG TCCTGCTGCT CGCCCAGGCC
GCCCGGCGGT TGGACATTGC CGACAAGCTC GCTGCTGTGA TCCCGGACCG TCGTGACCCC
AGCCGGGTTC TGCATCCGTT GCCCGAGATC CTGCTGGCGC GCATCCTGGC GATTGCCTGC
GGGTATGAGG ATGCGGACGA CCTCGACCAC CTGCGCGCCG ACCCCGCCTT CAAGCTCGCC
TGCGGCCGCC TGCCCGAGAG CGGGCACGAC CTGATGAGCC AGCCCACCGT CTCGCGGCTG
GAGAACACGC CGGGTCTGCG CGACCTCATC CGGCTCGGGC GGGTGCTGGT CGACCTCTAC
TGCGCCAGCT ACCCCGTCCC GCCCGACGCC GTCACCCTGG ACATCGACGA CACGTGCGAC
GTGGTGCACG GCCAGCAGCA ACTGTCGCTG TTCAACGCTC ATCACGATGA GCGCTGCTTT
CTGCCGATCC ACGTCTACGA CACCGCCACC AGCCGCCCGG TCGCGATGAT CCTGCGGCCG
GGCAAGACGC CCTCGGGCCG CGAAGTGCGT GGACATCTGC GCCGCCTCGT CCGGGCGATC
CGCCGTCATT GGCCGAACAC CGCGATCACC ATCCGGGGCG ATGGCCATTA CGGGCGGCCC
GAGGCCATGG ACTGGTGCGA GAACCATGGG GTCAGCTACG TCTTCGGCCT GAGCGGCACC
AAAGCGCTGG CGGCCAAGGT GGAACAGACG GCCGATCACA TCAGAGTTGT GCGAGCCATC
GACAACGAGG ACGCGGTGCG CGGCTTTGCC GAGACCCGGC ACGCGGCCAA ATCCTGGCGG
CAGGAGCGGC GCGTCGTCGC CCGTATCGAG GCGACCCGGC TCGGCCTCGA CATCCGCTAT
GTCGTCACAA ACATCACGAC CGGCACGCCG GAATGGCTCT ATGCCGACCT GTACTGTGCC
CGCGGACAGG CCGAGAACCT GATCAAGCTG CACAAGAGCC AGCTCGCCTC CGACCGTACC
TCGTGCCGGC ATCCCGCCGC CAACCAGATG CGGCTCGTCC TGCACACGGC GGCCTACTGG
CTGATGCTGA GCGTGCGTGA GGCCATCCCG AAGGCGCACC GCCTCGCCAC GGCCGAGTTC
GCCACGCTCC GGCTGCGCCT CCTGAAGCTC GGCGCCCGCA TCCGCGAGAC CGCCAGCCGG
GTTCGCCTCG CCTTCGCCGC CGCCTGTCCT GAGGCCGACC TACTGAGCCA TCTCGCGGCC
ACGCTCGCCC CAGCACCTGG TTAA
 
Protein sequence
MSDPTCLPFA FPSVRGKKLT AAFDGGRLTS DGGVLLLAQA ARRLDIADKL AAVIPDRRDP 
SRVLHPLPEI LLARILAIAC GYEDADDLDH LRADPAFKLA CGRLPESGHD LMSQPTVSRL
ENTPGLRDLI RLGRVLVDLY CASYPVPPDA VTLDIDDTCD VVHGQQQLSL FNAHHDERCF
LPIHVYDTAT SRPVAMILRP GKTPSGREVR GHLRRLVRAI RRHWPNTAIT IRGDGHYGRP
EAMDWCENHG VSYVFGLSGT KALAAKVEQT ADHIRVVRAI DNEDAVRGFA ETRHAAKSWR
QERRVVARIE ATRLGLDIRY VVTNITTGTP EWLYADLYCA RGQAENLIKL HKSQLASDRT
SCRHPAANQM RLVLHTAAYW LMLSVREAIP KAHRLATAEF ATLRLRLLKL GARIRETASR
VRLAFAAACP EADLLSHLAA TLAPAPG