| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Mpop_3952 |
|---|
| Symbol | |
|---|
| ID | 6312191 |
|---|
| Type | CDS |
|---|
| Is gene spliced | No |
|---|
| Is pseudo gene | No |
|---|
| Organism name | Methylobacterium populi BJ001 |
|---|
| Kingdom | Bacteria |
|---|
| Replicon accession | NC_010725 |
|---|
| Strand | + |
|---|
| Start bp | 4212409 |
|---|
| End bp | 4213056 |
|---|
| Gene Length | 648 bp |
|---|
| Protein Length | 215 aa |
|---|
| Translation table | 11 |
|---|
| GC content | 70% |
|---|
| IMG OID | 642652654 |
|---|
| Product | (2Fe-2S)-binding domain protein |
|---|
| Protein accession | YP_001926614 |
|---|
| Protein GI | 188583169 |
|---|
| COG category | [C] Energy production and conversion |
|---|
| COG ID | [COG2080] Aerobic-type carbon monoxide dehydrogenase, small subunit CoxS/CutS homologs |
|---|
| TIGRFAM ID | |
|---|
| 
|
Plasmid Coverage information |
| Num covering plasmid clones | 17 |
|---|
| Plasmid unclonability p-value | 1 |
|---|
| Plasmid hitchhiking | No |
|---|
| Plasmid clonability | normal |
|---|
| |
Fosmid Coverage information |
| Num covering fosmid clones | 27 |
|---|
| Fosmid unclonability p-value | 0.575652 |
|---|
| Fosmid Hitchhiker | No |
|---|
| Fosmid clonability | normal |
|---|
| |
Sequence |
| Gene sequence | ATGGACCATT CGACGAGAGA CCGGCGCTTC GACCCCACGC GCCGCACGGT GATGGGGACC
TGCGCGGCCC TGGCGACCTT GAGCGGCCCC CTCCGCGGCC AGGCCCAGGC CGCCCCGGCG
GCCGGCGATC CCCAGCCGCA GACCATGCCG GTCTCGCTCA CGATCAACGG GCAGCGGCAC
GACCTCACCC TCGACACCCG CACCACGCTG CTCGACGCCC TGCGCGAGCA TCTCGACCTC
ACCGGCTCGA AGAAGGGCTG CGATCACGGT CAGTGCGGCG CCTGCACGGT TCTGGTGAAC
GGGCGGCGGA TCAATTCCTG CCTGACGCTG GCCGCCATGC ACGAGGGGGA CGACGTCACC
ACCATCGAGG GGCTGGCGAA GGGCGAGGAA CTGCACCCGC TCCAGGCCGC CTTCCTGCAC
CATGACGGCT ACCAGTGCGG CTACTGCACA CCGGGCCAGA TCTGCTCCGC CGCCGGCATG
TTCTCGGAGA TCGAGGCGGG CTGGCCGAGC CACGTCACCG ACGACCTCAC GCAGAAGGCT
TCGCTCAGCG ACGCGGAAAT CCGCGAGCGG ATGAGCGGCA ACATCTGCCG CTGCTCGGCC
TATCCCAACA TCGTCGCGGC GATCCGCGAC GCCAGCACCA AGATCTGA
|
|---|
| Protein sequence | MDHSTRDRRF DPTRRTVMGT CAALATLSGP LRGQAQAAPA AGDPQPQTMP VSLTINGQRH
DLTLDTRTTL LDALREHLDL TGSKKGCDHG QCGACTVLVN GRRINSCLTL AAMHEGDDVT
TIEGLAKGEE LHPLQAAFLH HDGYQCGYCT PGQICSAAGM FSEIEAGWPS HVTDDLTQKA
SLSDAEIRER MSGNICRCSA YPNIVAAIRD ASTKI
|
|---|
| |