Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | Mpop_3949 |
Symbol | |
ID | 6312188 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Methylobacterium populi BJ001 |
Kingdom | Bacteria |
Replicon accession | NC_010725 |
Strand | + |
Start bp | 4206987 |
End bp | 4209404 |
Gene Length | 2418 bp |
Protein Length | 805 aa |
Translation table | 11 |
GC content | 69% |
IMG OID | 642652651 |
Product | penicillin-binding protein, 1A family |
Protein accession | YP_001926611 |
Protein GI | 188583166 |
COG category | [M] Cell wall/membrane/envelope biogenesis |
COG ID | [COG5009] Membrane carboxypeptidase/penicillin-binding protein |
TIGRFAM ID | [TIGR02074] penicillin-binding protein, 1A family |
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Plasmid Coverage information |
Num covering plasmid clones | 7 |
Plasmid unclonability p-value | 1 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
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Fosmid Coverage information |
Num covering fosmid clones | 26 |
Fosmid unclonability p-value | 0.665129 |
Fosmid Hitchhiker | No |
Fosmid clonability | normal |
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Sequence |
Gene sequence | ATGCGTTTCA TCCTGCGATT CTTCGCCTTC CTGTTCTCGG CCGGTGCCGT GGTGTTCTGC ATCGCCGCGG CGGTGGGCGC GTTCTTCTAC TGGAAGTACA GCCAGGACCT GCCGGACCAC GCCGCGCTCG CGAACTATGA GCCGCCGGTG ATGACCCGCG TCCACGCGGC CGACGGCTCG CTTCTGGCTG AGTACGCCCA CGAGCGCCGC CTCTACCTGC CGATCCAGGC GATGCCGAAG GTCGTGGTCG CCGCCTTCCT CTCGGCGGAG GACAAGAACT TCTACAAGCA CGGCGGCATC GACCCCGAGG GCATCGTCCG CGCGATCCTC ACCAACGCCC AGTCCGGCAA GAAGCAGGGC GCCTCGACCA TCACCCAGCA GGTGGCCAAG AACTTCCTGC TCTCGGCCGA GCAGACCTAC GACCGCAAGA TCAAGGAAGC GCTGATCGCC CTGCGGATCG AATCGACCTA CTCGAAGGAC AAGATCCTCG AACTCTACCT CAACGAGATT TTTCTCGGGA CGATCGTTCC GGGCCGCAAC CTGCACGGGG TGGCGGCGGC GGCGCTGGAT TACTTCGGCA AATCCGTCCA CGAACTGACG ATCAACGAGG CGGCCTACCT CGCCGCCCTG CCGAAGGGTC CGAACAACTA CCATCCCTAC CGGCGCACGC AGCAGGCCCT GGCGCGGCGC AACGAGATCA TCGGCCTGAT GGCCCAGAAC GGCTACATCA CCGCCGACGA GGCCACCGAG GCCAAGAAGC AGCCCCTCGG CGTCAACCCG CGGGTCGCCT TCCCCAACGC CGCCAATGCC AACTACTTCA CCGAAGAGGT CCGCCGCGAG ATCTCCGAGC GCTACGGCCA GTCCAAGCTC TACGAGGGCG GCCTGTCGGT GCGCGCCACC CTCGACCCGA AGATGCAGGC GCTGGCGCGC AAGGCGCTCA TCGACGGCCT CGTGCGCTAC GATCAGGCCC GCGGCTGGCG CGGCGCCGAG CACAAGGTCG ACCTGACCGG CCGCGACTGG GGCCAGGCGG TGGCCGAGAT GCCGGCGCTG GGCGACATCG CCCCCTGGCG GCTCGCCGTG GTCCTGAACA CCAATGGCGG CGTGGCGCAG ATCGGCCTGC AGCCCAAGCG CGAGCCCGGC GGCACCCTGT CGAAGGAGCG CGAGACCGGC GCGATCACCG CGGAAGGCGT GAAGTGGACC GGCCGCCCCG TCGCCACCGC GCTGAAGGCC GGCGACGTCG TCTATGTCGA GGCGATCGAT GCGGGGAAGG GCACCTACCG CCTGCGCCAG AAGCCCGAGG TGTCGGGCGC CATCGTCGCG ATGGACCCCT ATACCGGGCG CGTCCACGCC ATGGTCGGCG GCTTCTCCTA CGAGGAATCC GAGTTCAACC GCGCGACGCA GGCGATGCGC CAGCCCGGCT CGTCGTTCAA GCCGATCGTC TACTCGGCGG CGCTCGACAA CGGCTACACC CCGTCCTCGG TGGTCCTCGA CGCGCCCATC ACCATCGAGG CCGGCCCCGG CCAGGAAGCG TGGTCGCCCT CGAACTACGA CGGCAAGTCC GGCGGCCCGC ACACGCTCCG CTACGGCATC GAGCACTCGA AGAACCTGAT GACGGTGCGG CTCGCCAAGG ATATCGGCAT GCCGCTCATC GCCGAATATG CCCGCCGCTT CGGCGTCTAC GACGACCTGC TCCCGGTCCT GCCGATGTCG CTGGGCGCGG GCGAGACCAC GGTGATGCGC ATGGTCACCG CCTACTCGAT GCTGGCCAAT GGCGGGCGGC GCATCCGCCC GACCCTGATC GACCGCATCC AGGACCGCAC CGGCGAGACG ATCTACCGCC ACGACAACCG CAAATGCGTC GGCTGCGACG CGGAGAAGTG GTCGGGCCAG GACGAGCCGA AGCTCGTGGA CGAGTCCGAG CAGGTGCTCG ACCCGCTCAC CGCCTACCAG ATGGTCTCGA TCATGGAGGG CGTGGTCCAG CGCGGCACGG CGACGATCCT CAAGCAGATC GGCAAGCCGC TCGCGGGCAA GACCGGCACG ACCAACGACG CCAAGGATGC GTGGTTCGTG GGCTTCTCCC CCGATCTCGC GGTCGGCGTC TATCTCGGCT TCGACAAGCC GCGCTCGCTG GGCGACCGCG CCACCGGCGG CGGGCTCGCC GCGCCCATCG CCCTCGACTT CCTGAAGGTC GCGCTCAAGG ACAAGCCGCC GACGCCGTTC CGGGTGCCGC CGGGGATCAA GCTGATCCGC GTCAACGCAT CGTCCGGCAC CCGCGCCGGT TCGGGCGAGG GCGGCGGCAC CATCCTCGAA GCGTTCAAGC CCGGCACCGC CCCGCCGGAC GCCTACGTCG CCCCCGCCGC CCCGGCCGCG GTGCCGCCGG ATGCGGGCGC CGCCGCCCAG GCCGGCGGGG TGTACTGA
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Protein sequence | MRFILRFFAF LFSAGAVVFC IAAAVGAFFY WKYSQDLPDH AALANYEPPV MTRVHAADGS LLAEYAHERR LYLPIQAMPK VVVAAFLSAE DKNFYKHGGI DPEGIVRAIL TNAQSGKKQG ASTITQQVAK NFLLSAEQTY DRKIKEALIA LRIESTYSKD KILELYLNEI FLGTIVPGRN LHGVAAAALD YFGKSVHELT INEAAYLAAL PKGPNNYHPY RRTQQALARR NEIIGLMAQN GYITADEATE AKKQPLGVNP RVAFPNAANA NYFTEEVRRE ISERYGQSKL YEGGLSVRAT LDPKMQALAR KALIDGLVRY DQARGWRGAE HKVDLTGRDW GQAVAEMPAL GDIAPWRLAV VLNTNGGVAQ IGLQPKREPG GTLSKERETG AITAEGVKWT GRPVATALKA GDVVYVEAID AGKGTYRLRQ KPEVSGAIVA MDPYTGRVHA MVGGFSYEES EFNRATQAMR QPGSSFKPIV YSAALDNGYT PSSVVLDAPI TIEAGPGQEA WSPSNYDGKS GGPHTLRYGI EHSKNLMTVR LAKDIGMPLI AEYARRFGVY DDLLPVLPMS LGAGETTVMR MVTAYSMLAN GGRRIRPTLI DRIQDRTGET IYRHDNRKCV GCDAEKWSGQ DEPKLVDESE QVLDPLTAYQ MVSIMEGVVQ RGTATILKQI GKPLAGKTGT TNDAKDAWFV GFSPDLAVGV YLGFDKPRSL GDRATGGGLA APIALDFLKV ALKDKPPTPF RVPPGIKLIR VNASSGTRAG SGEGGGTILE AFKPGTAPPD AYVAPAAPAA VPPDAGAAAQ AGGVY
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