Gene Mpop_3932 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagMpop_3932 
Symbol 
ID6312229 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameMethylobacterium populi BJ001 
KingdomBacteria 
Replicon accessionNC_010725 
Strand
Start bp4185835 
End bp4186923 
Gene Length1089 bp 
Protein Length362 aa 
Translation table11 
GC content69% 
IMG OID642652634 
Productpermease YjgP/YjgQ family protein 
Protein accessionYP_001926594 
Protein GI188583149 
COG category[R] General function prediction only 
COG ID[COG0795] Predicted permeases 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones12 
Plasmid unclonability p-value
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones23 
Fosmid unclonability p-value0.180246 
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGCTGATCG GCGCCACCCT CGGCCGCTAC TTCGCGTGGC GCTTCGTGCG CACCATCCTG 
GGCGTGTTCC TCACCGTCTT CGCCCTGGTC TACACCCTCG ACTTCGTCGA GCTGCTGCGC
CGCGCCGGCG ATTCCGAGGG CGCCTCCACC GGGCTGATGG CGCAACTCGC CCTCTACCGC
ACCCCGGCGG TCGCCGAGAG CGTGCTGCCC TTCGCCGTGC TGTTCGGCTC CATGGCCGCC
CTGCTCCAGC TCTCGCGCAA GCTTGAACTC GTGGTGGCGC GGGCCGCCGG CATCTCCGCC
TGGCAGTTCC TCCAGCCCGG CGCCTTCGTG GCGCTGGCGA TCGGGGCGCT GGCGATCGGC
GCCTACAACC CGCTCTCGGC GGCGCTCAAG CAGCGCTCCA GCGAGATCGA GGCGAAGATC
TTCGCCAAAT CCACCAAGGC GGGGACCGGC AAGGACCTGT GGCTGCGCCA GCGCAGCGTC
GACGGGCAGG CGATCATCCG CGCCGAGACG GCCGTCGAGG GCACGACCAC GCTTGCCGGC
GTCACCGTCT TCCAGTTCGA CGACGCGGGC GTCTTCACCG CGCAGATCGA GGCGGCGCGG
GCGACCCTGC ACGACGGCTG GTGGGAATTG CGCGATGTGC GCGTTCTCAC GCGCGATGAG
CCGCCCGAGA GCCACGAGGT CTATCTCGTC GCCTCGACGC TCGACCCGAG TCAGATCCGC
CAGCGCTTCA CCCCCCCGGA ATCTGTGCCC TTCTGGCAAC TTCCCGAGAC CATCGCGCGC
CACGAGCGGG CGGGGCTGGA TGCGACGCGC TACCGGCTCC AGTACGATGT GCTGCTGGCA
ACGCCCCTGC TCTACCTCGC GATGGTCCTC GTGGCGGCAA CGGTTTCCTT AAGGTTCTTC
CGCTTTGGTG GTGTCGGAAA GCTGGTGCTC GGCGGAGTGA GCGCGGGCTT CGTGCTGTAC
GTCGCGCGGC AGGTCATGGA GGGCCTCGGC GCGTCGGGCA TGGTCGCGCC GACAGTGGCG
GCGTGGTTCC CCGCCGTGGT AGGGAGTCTG CTCGGTACGC TCACGCTTCT CTACCAGGAG
GACGGCTGA
 
Protein sequence
MLIGATLGRY FAWRFVRTIL GVFLTVFALV YTLDFVELLR RAGDSEGAST GLMAQLALYR 
TPAVAESVLP FAVLFGSMAA LLQLSRKLEL VVARAAGISA WQFLQPGAFV ALAIGALAIG
AYNPLSAALK QRSSEIEAKI FAKSTKAGTG KDLWLRQRSV DGQAIIRAET AVEGTTTLAG
VTVFQFDDAG VFTAQIEAAR ATLHDGWWEL RDVRVLTRDE PPESHEVYLV ASTLDPSQIR
QRFTPPESVP FWQLPETIAR HERAGLDATR YRLQYDVLLA TPLLYLAMVL VAATVSLRFF
RFGGVGKLVL GGVSAGFVLY VARQVMEGLG ASGMVAPTVA AWFPAVVGSL LGTLTLLYQE
DG