Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | Mpop_3925 |
Symbol | |
ID | 6312242 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Methylobacterium populi BJ001 |
Kingdom | Bacteria |
Replicon accession | NC_010725 |
Strand | - |
Start bp | 4177041 |
End bp | 4178144 |
Gene Length | 1104 bp |
Protein Length | 367 aa |
Translation table | 11 |
GC content | 73% |
IMG OID | 642652627 |
Product | alpha/beta hydrolase fold |
Protein accession | YP_001926587 |
Protein GI | 188583142 |
COG category | [R] General function prediction only |
COG ID | [COG0596] Predicted hydrolases or acyltransferases (alpha/beta hydrolase superfamily) |
TIGRFAM ID | |
|
|
Plasmid Coverage information |
Num covering plasmid clones | 6 |
Plasmid unclonability p-value | 0.182869 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
| |
Fosmid Coverage information |
Num covering fosmid clones | 25 |
Fosmid unclonability p-value | 0.384279 |
Fosmid Hitchhiker | No |
Fosmid clonability | normal |
| |
Sequence |
Gene sequence | GTGTTTCCCT TCGACCCAAC CCGTCCGGCG CGGCGCCGCG TGCGCCGGAG CCTCGCCCGC ACGACGCGTC AGGTCACGCG GTCCATCGAG GACGCCGCCA AGGACGCCAT GAAGGACGCC GTGAAGGCGG TGACCCGATC GACCGAGCAG GCGATTCGGG AGACGCGCAA GGCGACGGCC CGGTCCGTGA AGCGGACGGT GCGGCACACC GAGAAGGTGG CCGAAGCCGC CTTCGCCGCG TCCGGAGCCG GGTCCGTCCG CCGGCCCCCC GGCCGGTTCG TCACCGTCGA CGGCCTGCCC GTGCACGTGA TCGTCCGGGG GCGCGGGCGC CCGGTGGTGC TCGTCCACGG CAACGGCACC ATGGCCGAGG ATTTTTCGAT CTGCGGCCTG ATCGACCGGC TGGCGGCGCG CTACCGGGTC ATCGCGATCG ACCGCCCCGG CTTCGGCTAC ACCGCCCGCC CCCGCCACCG CCTCTGGACG GCTCAAGGTC AGGCCGTGCT CCTTCACCGG GTGCTGGAGC AACTCGCCGT CGAGCGGCCC CTCGTGGTCG GGCATTCCTG GGGCACGATC GTCGCCCTCG CGCTCGCCGC CGACGAGCGG CGCCCCCTGC GCGGTCTCGT GCTGCTCTCG GGCTCCTACT TTCCGGGACA TCGGTTCGAC GCGGCCCTGA TCGCCCCGCT CGCGGTGCCC GGCTTCGGCG ACGCGGCTCG CGCGATGGTG CCCGCCAAGA TGAGCGCGGC GCTCACCGAA CAGTCGTTCC GGCAGGTGTT CTGGCCGCAG GCCGTGCCGG CCCGGTTCAA GGCGCGCTTC CCCGTCGAGA TCGCGGCGGC GGCGACGCAG GCCCGCGCGG TCTCGGAGGA TGCCGCCTCG ATGAACGCGG CCGTCACGGG GCTCCAGCGT CGCTACGCGA GTTTGACGCT GCCGGTCTCC ATCCTGGCCG GGGATGCGGA CGCCATCGTC AAGGCCGGCG AGCACGCCGT GCGGCTGCAC ACGACGATCC CCGGCAGCAC CCTGCGGCTC CTGCCCGGCA TCGGCCACAT GACGCACTAC GCCGCGCGGC TGAAGGTCGA GCGCGCGATC GATGAGGTGA TGACGCGCAG ATAG
|
Protein sequence | MFPFDPTRPA RRRVRRSLAR TTRQVTRSIE DAAKDAMKDA VKAVTRSTEQ AIRETRKATA RSVKRTVRHT EKVAEAAFAA SGAGSVRRPP GRFVTVDGLP VHVIVRGRGR PVVLVHGNGT MAEDFSICGL IDRLAARYRV IAIDRPGFGY TARPRHRLWT AQGQAVLLHR VLEQLAVERP LVVGHSWGTI VALALAADER RPLRGLVLLS GSYFPGHRFD AALIAPLAVP GFGDAARAMV PAKMSAALTE QSFRQVFWPQ AVPARFKARF PVEIAAAATQ ARAVSEDAAS MNAAVTGLQR RYASLTLPVS ILAGDADAIV KAGEHAVRLH TTIPGSTLRL LPGIGHMTHY AARLKVERAI DEVMTRR
|
| |