Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | Mpop_3921 |
Symbol | |
ID | 6312238 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Methylobacterium populi BJ001 |
Kingdom | Bacteria |
Replicon accession | NC_010725 |
Strand | - |
Start bp | 4173410 |
End bp | 4173964 |
Gene Length | 555 bp |
Protein Length | 184 aa |
Translation table | 11 |
GC content | 70% |
IMG OID | 642652623 |
Product | beta-Ig-H3/fasciclin |
Protein accession | YP_001926583 |
Protein GI | 188583138 |
COG category | [M] Cell wall/membrane/envelope biogenesis |
COG ID | [COG2335] Secreted and surface protein containing fasciclin-like repeats |
TIGRFAM ID | |
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Plasmid Coverage information |
Num covering plasmid clones | 3 |
Plasmid unclonability p-value | 0.00329996 |
Plasmid hitchhiking | No |
Plasmid clonability | decreased coverage |
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Fosmid Coverage information |
Num covering fosmid clones | 22 |
Fosmid unclonability p-value | 0.130645 |
Fosmid Hitchhiker | No |
Fosmid clonability | normal |
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Sequence |
Gene sequence | ATGTCCAAGA GCCTTCTCCG CCTCACCCTC GGCCTCGCCC TCGCGGCCGC CGCCGTCCCG GCGCTCGCCA AGAACCCGAT GGTCGGCGGC GCGCCGATGT ATGCGAGCAA GACGATCGTC GAGAACGCGG TCAACTCGAA GGATCACACC ACGCTCGTCG CCGCCGTGAA GGCCGCGGGC CTCGTCGACA CGCTGTCGGG CCCCGGCCCC TTCACCGTGT TCGCGCCGAC CGACGCCGCC TTCAGCAAGC TGCCGCCGGG CACGGTCGAG ACCCTGGTGC AGCCGCAGAA CAAGGCGCAG CTCACCGGCA TCCTGACCTA CCACGTGGTG CCGGGCACCT ACACCGCGAA GGCGCTGATG AAGCTGGTCC GCGACGGCGG TGGCGAGGCC ACGCTGAAGA CGGTTCAGGG CGAGCCGCTC ACCGTGGCGA TGGCCCGTGG GGGCAAGGGG CTGACCCTGA CCGACGCCAA GGGCAACACC GCCCGCGTCA CGATCGCCAA CGTGATGCAG TCGAACGGCG TGATCCACGT CATCAACGGC GTGCTGATGC CCTGA
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Protein sequence | MSKSLLRLTL GLALAAAAVP ALAKNPMVGG APMYASKTIV ENAVNSKDHT TLVAAVKAAG LVDTLSGPGP FTVFAPTDAA FSKLPPGTVE TLVQPQNKAQ LTGILTYHVV PGTYTAKALM KLVRDGGGEA TLKTVQGEPL TVAMARGGKG LTLTDAKGNT ARVTIANVMQ SNGVIHVING VLMP
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