| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Mpop_3919 |
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| Symbol | |
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| ID | 6312236 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Methylobacterium populi BJ001 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_010725 |
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| Strand | + |
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| Start bp | 4171950 |
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| End bp | 4172552 |
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| Gene Length | 603 bp |
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| Protein Length | 200 aa |
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| Translation table | 11 |
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| GC content | 71% |
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| IMG OID | 642652621 |
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| Product | RNA polymerase, sigma-24 subunit, ECF subfamily |
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| Protein accession | YP_001926581 |
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| Protein GI | 188583136 |
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| COG category | [K] Transcription |
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| COG ID | [COG1595] DNA-directed RNA polymerase specialized sigma subunit, sigma24 homolog |
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| TIGRFAM ID | [TIGR02937] RNA polymerase sigma factor, sigma-70 family |
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Plasmid Coverage information |
| Num covering plasmid clones | 5 |
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| Plasmid unclonability p-value | 0.0250534 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | 22 |
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| Fosmid unclonability p-value | 0.125751 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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| |
Sequence |
| Gene sequence | ATGAGCCCGC AGAATGAGCA GGATCGCTCA GGGGGAGGGG GAAGCGTGCC GGACGGTGGG
GCACCTGCCG ACGCAGAACT TGCGCGGCTG ATCGGGGCCG TGGCCGCGGG CGACCGCGCG
GCTCTGCGCG CGCTCTACGA TGCGGCGGCC CCGAAACTTC TCGGGATCAT CCTTCGTATC
CTGCAGGACC GGAGCGCGGC CGAGGATGCG CTGCAGGAGG TGTTCGTGCG CATCTGGCAG
CGGGCAGGCA CGTATGATCC GCAGGCCGGC CCCCCGCTCG TCTGGCTGGG TGCGATCGCC
CGGCACAAGG CCATCGACCG GCTGCGTCAG GACAAGGCCG CCCGGCTGAC CCAGGCCGAA
GAGGGCTGGA TCGAACGCCT GGCCGATGCA AGCGACGGCG AGACGGATCT CGCCCGCCGC
GATGCCCTCG CGCATTGCCT CGACACCGTG GACGCCGCCC AGCGCGACTG CCTCGTCCTG
GCCTATTGCG AGGGCTGGTC GCGCGAGGAA CTGGCCGCAC GCTACGACCG GCCCGTCAAC
ACGATCAAGA CGTGGCTGCG CCGCGGCCTG CTCAGCCTGC GCGGCTGTCT GGAGGCAGCA
TGA
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| Protein sequence | MSPQNEQDRS GGGGSVPDGG APADAELARL IGAVAAGDRA ALRALYDAAA PKLLGIILRI
LQDRSAAEDA LQEVFVRIWQ RAGTYDPQAG PPLVWLGAIA RHKAIDRLRQ DKAARLTQAE
EGWIERLADA SDGETDLARR DALAHCLDTV DAAQRDCLVL AYCEGWSREE LAARYDRPVN
TIKTWLRRGL LSLRGCLEAA
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