Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | Mpop_3909 |
Symbol | |
ID | 6312262 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Methylobacterium populi BJ001 |
Kingdom | Bacteria |
Replicon accession | NC_010725 |
Strand | - |
Start bp | 4164272 |
End bp | 4165192 |
Gene Length | 921 bp |
Protein Length | 306 aa |
Translation table | 11 |
GC content | 74% |
IMG OID | 642652611 |
Product | short-chain dehydrogenase/reductase SDR |
Protein accession | YP_001926571 |
Protein GI | 188583126 |
COG category | [R] General function prediction only |
COG ID | [COG4221] Short-chain alcohol dehydrogenase of unknown specificity |
TIGRFAM ID | |
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Plasmid Coverage information |
Num covering plasmid clones | 7 |
Plasmid unclonability p-value | 0.235938 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
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Fosmid Coverage information |
Num covering fosmid clones | 21 |
Fosmid unclonability p-value | 0.0957503 |
Fosmid Hitchhiker | No |
Fosmid clonability | normal |
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Sequence |
Gene sequence | ATGGCGCGAC ATCCCTGGAC CGTTGCCGAC ATCCCGTCCC AGGCCGGTCG CCGCGCCGTG GTGACGGGAG CGAGCGCCGG GCTCGGGTTC GAGACGGCGC GGGCGCTGGC CGGGGCGGGC GCCGCGGTGG TGCTGGCGGT GCGCGATCCC GGCAAGGGCG AGCGCGCCGC CGCGGCGATC CGGCGGGAGC ATCCCGGCGC CGAGCTGTCG GTGCGCCGGA TCGACACCGC CTCGCTGGCC TCGGTCCGCG CCTTCGCCGA GGACTGGCCG GACGATGCCC CGATCGACCG GCTCGTGCTC AATGCCGGCA TCGCCGCGGT GCCCCGGCGC GAGGAGAGCG TGGACGGGTT CGAGCGGCAA CTCGCCACGA ACTATCTCGG CCATTTCGCG CTGACCGGGC TGCTGCTGCC GTCTTTGAGT CCCTCGGCGC GGGTGGTGTC GGTGGCGAGT CTCGCCCATC GCGGCGGCGC GATCCGGTTC GACGATCTGC ACTGGCGCAA GACCTACGGA TCGCAGCCCG CCTACCGGCA GAGCAAGCTC GCGCTGCTGA TGTTCGCCCT CGAACTCGAC CGGCGGCTCA AGGCGGCAGG CTCCGGCATC GCCTCGCTCG CCGCGCATCC GGGGCTCGCG GTCACCGAAG TGTTCCGCCG GGGCGATCGG GCCGGCGCCC TCCAGCAGGG GGCGGGGCGG ATCATCTTCT CGCTGATCGG CCAGTCGGCG GCGCAGGGGG CACTGCCGAT CCTCTATGCC GCCGCGGCGC CGGAAGCCGA GCGCGGGGGC TATTACGGGC CGGACGGCTT CTGGGAGGCG CGCGGCGATC CCAAGCCGGC GCAGATCGCT GCCCAGGCCC TGGACCGGAC GGCGGCCGGG CGCCTCTGGG CGGTCTCGGA GACCCTGACG GGGGTGCGGT TCGCGGTGTG A
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Protein sequence | MARHPWTVAD IPSQAGRRAV VTGASAGLGF ETARALAGAG AAVVLAVRDP GKGERAAAAI RREHPGAELS VRRIDTASLA SVRAFAEDWP DDAPIDRLVL NAGIAAVPRR EESVDGFERQ LATNYLGHFA LTGLLLPSLS PSARVVSVAS LAHRGGAIRF DDLHWRKTYG SQPAYRQSKL ALLMFALELD RRLKAAGSGI ASLAAHPGLA VTEVFRRGDR AGALQQGAGR IIFSLIGQSA AQGALPILYA AAAPEAERGG YYGPDGFWEA RGDPKPAQIA AQALDRTAAG RLWAVSETLT GVRFAV
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