Gene Mpop_3909 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagMpop_3909 
Symbol 
ID6312262 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameMethylobacterium populi BJ001 
KingdomBacteria 
Replicon accessionNC_010725 
Strand
Start bp4164272 
End bp4165192 
Gene Length921 bp 
Protein Length306 aa 
Translation table11 
GC content74% 
IMG OID642652611 
Productshort-chain dehydrogenase/reductase SDR 
Protein accessionYP_001926571 
Protein GI188583126 
COG category[R] General function prediction only 
COG ID[COG4221] Short-chain alcohol dehydrogenase of unknown specificity 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones
Plasmid unclonability p-value0.235938 
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones21 
Fosmid unclonability p-value0.0957503 
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGGCGCGAC ATCCCTGGAC CGTTGCCGAC ATCCCGTCCC AGGCCGGTCG CCGCGCCGTG 
GTGACGGGAG CGAGCGCCGG GCTCGGGTTC GAGACGGCGC GGGCGCTGGC CGGGGCGGGC
GCCGCGGTGG TGCTGGCGGT GCGCGATCCC GGCAAGGGCG AGCGCGCCGC CGCGGCGATC
CGGCGGGAGC ATCCCGGCGC CGAGCTGTCG GTGCGCCGGA TCGACACCGC CTCGCTGGCC
TCGGTCCGCG CCTTCGCCGA GGACTGGCCG GACGATGCCC CGATCGACCG GCTCGTGCTC
AATGCCGGCA TCGCCGCGGT GCCCCGGCGC GAGGAGAGCG TGGACGGGTT CGAGCGGCAA
CTCGCCACGA ACTATCTCGG CCATTTCGCG CTGACCGGGC TGCTGCTGCC GTCTTTGAGT
CCCTCGGCGC GGGTGGTGTC GGTGGCGAGT CTCGCCCATC GCGGCGGCGC GATCCGGTTC
GACGATCTGC ACTGGCGCAA GACCTACGGA TCGCAGCCCG CCTACCGGCA GAGCAAGCTC
GCGCTGCTGA TGTTCGCCCT CGAACTCGAC CGGCGGCTCA AGGCGGCAGG CTCCGGCATC
GCCTCGCTCG CCGCGCATCC GGGGCTCGCG GTCACCGAAG TGTTCCGCCG GGGCGATCGG
GCCGGCGCCC TCCAGCAGGG GGCGGGGCGG ATCATCTTCT CGCTGATCGG CCAGTCGGCG
GCGCAGGGGG CACTGCCGAT CCTCTATGCC GCCGCGGCGC CGGAAGCCGA GCGCGGGGGC
TATTACGGGC CGGACGGCTT CTGGGAGGCG CGCGGCGATC CCAAGCCGGC GCAGATCGCT
GCCCAGGCCC TGGACCGGAC GGCGGCCGGG CGCCTCTGGG CGGTCTCGGA GACCCTGACG
GGGGTGCGGT TCGCGGTGTG A
 
Protein sequence
MARHPWTVAD IPSQAGRRAV VTGASAGLGF ETARALAGAG AAVVLAVRDP GKGERAAAAI 
RREHPGAELS VRRIDTASLA SVRAFAEDWP DDAPIDRLVL NAGIAAVPRR EESVDGFERQ
LATNYLGHFA LTGLLLPSLS PSARVVSVAS LAHRGGAIRF DDLHWRKTYG SQPAYRQSKL
ALLMFALELD RRLKAAGSGI ASLAAHPGLA VTEVFRRGDR AGALQQGAGR IIFSLIGQSA
AQGALPILYA AAAPEAERGG YYGPDGFWEA RGDPKPAQIA AQALDRTAAG RLWAVSETLT
GVRFAV