Gene Mpop_3904 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagMpop_3904 
Symbol 
ID6312285 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameMethylobacterium populi BJ001 
KingdomBacteria 
Replicon accessionNC_010725 
Strand
Start bp4158458 
End bp4159831 
Gene Length1374 bp 
Protein Length457 aa 
Translation table11 
GC content68% 
IMG OID642652606 
Productglutamine synthetase, type III 
Protein accessionYP_001926566 
Protein GI188583121 
COG category[E] Amino acid transport and metabolism 
COG ID[COG0174] Glutamine synthetase 
TIGRFAM ID[TIGR03105] glutamine synthetase, type III 


Plasmid Coverage information

Num covering plasmid clones
Plasmid unclonability p-value0.580767 
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones22 
Fosmid unclonability p-value0.157451 
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGGGCCACG CAACCGACAT CGATCCGAAC GTGCGCGCCG TGCAGGAGGA TCTGCGCAGC 
AAAGGCGTGA AATACGTCAT CGGCGCCTAT GTCGACATCC ACGGCGCGCA GAAGGCCAAG
GTGGTGCCGA TCGACCACCT GCCGCAGATG GCGGCGGGCT CCGAGCGCTA CACCGGCTAC
GCCCTCGACG GCCTGGGCCA GGCCCCGAAC GAGGACGAAC TCGCCTCGGT CCCGGACCTG
TCGCGGGTGA TCCCGCTGCC CTGGGAGCGC AAACTCGCCT GGGCGCCGGC CGACCTCACC
TTCCAGGGCA AGCCCTACCC GCTCTCGACC CGCGTCGCGC TGAAGAACGT GCTCAAACAG
GCCGAGGCCA TGGGCTTCGG CTTCAACCTC GGCATCGAGT GCGAGATCTT CCTGCTGCGC
CAGGCCGCCG ACGGCTCGCT GCACACGCCG GTGGCGGACG ATAAACTCGT AAAACCCTGC
TACGACGTGC GCGGCTTCGT CGACAACTTC TCCTGGCTCG ACAAGGTCGC GACCACGATC
AACGATCTCG GCTGGGACCT GTACTCGTTC GACCACGAGG ATGCCAACGG ACAGTTCGAG
TTCGACTTCA ACTACGCCGA CGCGCTCACG ACCTGCGACC GGCTGACCTT CTTCCGCATG
ATGACCAAGC ATTACGCGAA GGAGGAGGGT TTGATCGCGA CGATGATGCC GAAACCCTTC
GCCGACCGCA CCGGCAACGG CGCCCATTTC AACATGTCGC TCGCCGACCG CGAGACCGGC
CGCAACCTGT TCGCCTGCGC CCCCGGCGAG GATCCCCGGG GCCTGGGCCT CACCGAGACC
GGCTACCACT TCATCGGCGG CGTGCTGCGC CACGGCCGGG CGCTCTGCGC GGCCTTCGCG
CCCACCGTGA ACAGCTACAA GCGCCTCGTG CGCCAGGGGG CGATGGCCGG CTTCTCCTGG
GCGCCGGTGT TCAACTCCTA CGGCTCGAAC AATCGCACCA ACTCGGTGCG GGTGCCGGCC
GGCGGCGGGC GCTGCGAGAG CCGCAACGCC GACGGCGCGG TCAACCCCTA CCTCGCCGCC
GCCCTGGTGC TGGCCGCCGG CCTGGAGGGC GTGCGCGAGC GGATCGATCC GGGCCAGCCC
AACGAGGACA ATCTCTACGA GCTGAGCGAG GCCGAGCGCC GGGCGCGCGG CATCGGCTTC
CTGCCCCAGA CCCTGCAGGA AGCGGTCGAC GCCTTCGCCG CCGATCCCCT GGTCGAGGCC
ACCCTCGGCG CGGGCCTGCG CGAAGAGTTC ATCCGCACCA AGCGCGAGGA GTGGAACGCC
TACCATCTCA CGGTGAGCCC GTGGGAGATC GAGCGCTACA GCCACCTGTT CTAG
 
Protein sequence
MGHATDIDPN VRAVQEDLRS KGVKYVIGAY VDIHGAQKAK VVPIDHLPQM AAGSERYTGY 
ALDGLGQAPN EDELASVPDL SRVIPLPWER KLAWAPADLT FQGKPYPLST RVALKNVLKQ
AEAMGFGFNL GIECEIFLLR QAADGSLHTP VADDKLVKPC YDVRGFVDNF SWLDKVATTI
NDLGWDLYSF DHEDANGQFE FDFNYADALT TCDRLTFFRM MTKHYAKEEG LIATMMPKPF
ADRTGNGAHF NMSLADRETG RNLFACAPGE DPRGLGLTET GYHFIGGVLR HGRALCAAFA
PTVNSYKRLV RQGAMAGFSW APVFNSYGSN NRTNSVRVPA GGGRCESRNA DGAVNPYLAA
ALVLAAGLEG VRERIDPGQP NEDNLYELSE AERRARGIGF LPQTLQEAVD AFAADPLVEA
TLGAGLREEF IRTKREEWNA YHLTVSPWEI ERYSHLF