Gene Mpop_3901 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagMpop_3901 
Symbol 
ID6312282 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameMethylobacterium populi BJ001 
KingdomBacteria 
Replicon accessionNC_010725 
Strand
Start bp4156370 
End bp4157014 
Gene Length645 bp 
Protein Length214 aa 
Translation table11 
GC content66% 
IMG OID642652603 
Producthypothetical protein 
Protein accessionYP_001926563 
Protein GI188583118 
COG category[S] Function unknown 
COG ID[COG3665] Uncharacterized conserved protein 
TIGRFAM ID[TIGR03424] urea carboxylase-associated protein 1 


Plasmid Coverage information

Num covering plasmid clones14 
Plasmid unclonability p-value
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones25 
Fosmid unclonability p-value0.388062 
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGACCGACA CCGTGACCAC GCTCTTCGAT CATGTCGTTC TGGATCAGGT CGTGCCCGCC 
CAGGCGCCGT TCTCCACCCT CGTGCGGGCC GGCCAGATCG TCCGCATCGA GGATCTGGAG
GGCTGCCAAG CCGTCGACAC CCTGTTCTAC CGGGCCGACG ACCTGGGCGA GCGCTACTCC
TCGCAGGACA CCGTGCGCGC GCAGGGCGCG GCCTACGTCA CCACCGGCAC GCGGGTGATG
TCGAACGAGG GCCGGGTGAT GCTCACCGTC ACCGCCGATT CCTGCGGGCG CCACGACACC
TCGGCCGGAG CCTGCTCCTG CGAGAGCAAC ACCGTCCGCT TCGGCCACGC CACCAAGTAT
CTCCACGCCT GCCGCGAGAA CTTCGCGCTG GAAGTGGCGA AGTACGGCCT GTCGAAGCGC
GACATCGTGC CGAACATCAA CTTCTTCATG AACGTGCCGA TCGAGCAGGA TGGCGGGCTC
GCCATCGTCG ACGGCGTGTC GTCGCCCGGC GATTACGTCG AGCTCCGGGC CGAGATGGAC
GTGATCTGCG TGATCTCGAA CTGCCCGCAG ATCAACAACC CCTGCAACGG CTTCAACCCC
ACGCCGATCC GCGTGACGGT GCGCGAGGGT TCGGCCGATG TTTGA
 
Protein sequence
MTDTVTTLFD HVVLDQVVPA QAPFSTLVRA GQIVRIEDLE GCQAVDTLFY RADDLGERYS 
SQDTVRAQGA AYVTTGTRVM SNEGRVMLTV TADSCGRHDT SAGACSCESN TVRFGHATKY
LHACRENFAL EVAKYGLSKR DIVPNINFFM NVPIEQDGGL AIVDGVSSPG DYVELRAEMD
VICVISNCPQ INNPCNGFNP TPIRVTVREG SADV