| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Mpop_3895 |
|---|
| Symbol | |
|---|
| ID | 6312313 |
|---|
| Type | CDS |
|---|
| Is gene spliced | No |
|---|
| Is pseudo gene | No |
|---|
| Organism name | Methylobacterium populi BJ001 |
|---|
| Kingdom | Bacteria |
|---|
| Replicon accession | NC_010725 |
|---|
| Strand | - |
|---|
| Start bp | 4144625 |
|---|
| End bp | 4147387 |
|---|
| Gene Length | 2763 bp |
|---|
| Protein Length | 920 aa |
|---|
| Translation table | 11 |
|---|
| GC content | 75% |
|---|
| IMG OID | 642652597 |
|---|
| Product | multi-sensor hybrid histidine kinase |
|---|
| Protein accession | YP_001926557 |
|---|
| Protein GI | 188583112 |
|---|
| COG category | [K] Transcription
[T] Signal transduction mechanisms |
|---|
| COG ID | [COG0642] Signal transduction histidine kinase
[COG0745] Response regulators consisting of a CheY-like receiver domain and a winged-helix DNA-binding domain |
|---|
| TIGRFAM ID | |
|---|
| 
|
Plasmid Coverage information |
| Num covering plasmid clones | 3 |
|---|
| Plasmid unclonability p-value | 0.750763 |
|---|
| Plasmid hitchhiking | No |
|---|
| Plasmid clonability | normal |
|---|
| |
Fosmid Coverage information |
| Num covering fosmid clones | 25 |
|---|
| Fosmid unclonability p-value | 0.625428 |
|---|
| Fosmid Hitchhiker | No |
|---|
| Fosmid clonability | normal |
|---|
| |
Sequence |
| Gene sequence | GTGCGCGTCC CCTTCCCGAA CCCGATCCGC TCCCTGTCCG GGCGGCTGGC CCTGGCGGTG
GCGGGCGCCG TGGCGCTTGC CCTGCTCCTT CTCACCGGCC TCTCGACGTG GCGCGAGGTC
GAGCGCTACG CCGCGGCCAA GCGCGAACTC CTGCGCATGA CGGCGCAGAT CCTGGCCGCG
AGCGCCGCGC AGGCCACGGC GCAGGGGGAC GAGAGCGCCG CGCAGAGCAG CCTGCGGGCG
ATCGCCCATG GGCAGGCCCT GATCTACGCC GCGGTCGAGC GGGGTGACGG GGCGATCCTC
GCCGAGCAGG GCATCGGGCT GCGCCTCGCC AACGACATCG ATCTCGATCA GGGCTCCGTC
TCGCCGCTGG CGCTCATGAC GACGCGGACG CTGCGCGTCT CGGTCCCGAT CCTGGAGAAT
GCCCGCCCCA TCGGCCGCGT CGTCCTGGTC TCGGACAACC GCGACCTGGC CGGGCGCATC
GCGGAGGTCG GCCTGACGGC GGCGCTGGCC GGGATGCTCG CCCTGGCGCT CGGGCTCGCC
GTGTCGATGG GTCTGCAGCG CGGCGTCACC CGGCCGCTGG CCGCCCTGGC CCGGACCATG
GACGGGGTGC GCCTCGGCCA CGACTACACG AAGCGCGCCG AGGCGGCCGG CAGCCGCGAG
GTCGGGGCAC TGGCCGCGAG CTTCAACGAC CTGCTGCAGG CCGTGAACGA GCGCGACCGG
GCGATCGCCC GCCACAATGC CGGCCTGGAG GAGGAGATCC GGCTGCGGAC CCACGACCTG
ATCGAGGCCA AGCAGTCCGC CGACGAGGCC AACGCGGCCA AGTCCGTCTT CCTCGCGACC
ATGAGCCACG AGATCCGCAC GCCGATGAAC GGCATGCTGG TGATGGCCGA ACTCCTCGCC
TCGGCCGAGC TGCCGCCGCG TCAGCAGCGC TACGCCCAGG TCATCGCGCG CTCCGGCCAG
TCGCTGCTCG CCATCATCAA CGACATCCTC GATTTCGCGA AGGTGGAATC CGGCCGCCTT
GAGGTGGAGC GGATCCCGCT GAGCCCCCGC GACGTCGCCG ACACCGTCGT CACCCTGTTC
GCCGAGCGCG CGGCATCAGC GGGGCTCGAC CTCGCGGCGC AGATCGATGG GGACGTGCCC
CGCTCCCTCC TCGGCGATCC GGTGCGGCTC GGTCAGGTGC TCGGCAATTT CGTCTCGAAC
GCCCTGAAAT TCACCGCCGC CGGCCATGTC CTGGTGCGGA TGACGATGGA GGCCTCGGCC
TCCGGGCCGG TCCTGTGCAT CGCCGTCTCC GATACCGGCA TCGGCATTCC GGAGGACCGG
CTCGCCGGGA TCTTCACCGC CTTCACCCAG GCCGACCAGT CGATCGCCCG CCGGTTCGGC
GGCACCGGGC TCGGGCTGTC GATCGCCGAG CGCCTGATCG CGGCGATGGG CGGGTGCGTC
GGCGTCGAGA GCCGCCTCGG CGCGGGTTCG ACCTTCTGGG CGCGCATCCC CGCGGACGGC
GCGGATCCCG CCGCGCCGCC GGTCCGCCGC GCGCCCGCGG TCCCGGCCGC GATCCGCTTC
GACGCGGTCG GCGGGGCGAC GCGGATCGCG CTTGCCGCCG ATCTCGAGGC GGCGGGCTTC
CGTCCCGTGG AAGCCGGGGA CGGACACTGG TTCATCGACG CCGCCGCCCT GTCGGCGAGC
GGCCGCCGTC CGGAGGGCGC GGGCCGCGTC ATCGCCCTGG TGCCGCTCGG CGACGCCTCG
GGAACCGGGC TGCTGCGCGC CGGCCTCGCC GATGCCGTCC TGCGCCGGCC GCTCACGCAG
GCCGAGTGGC GCCCGCTCCT CGCGGCCCTG GCCGAGGGCG TGCCGCTCCC CGTCGAAGTC
CTGGCCGAAA CCTCCGGCGC GGGGGACGGC ACGGCCGCGT CCCTGCCCTC CTTCGCCGCG
GCGCGGGTGC TCCTGGCCGA CGACAGCGCC GTCAACCGCG AGGTGGCATC CGAGGCGCTC
GGCCGCTTCG GCGTGCGCGA CATCGTCTGT GTCGAGGACG GCCAAGCCGC CGTCGAGGCC
GCCGCCGCGG CCCGCTTCGA CCTCGTCCTG ATGGATGGCA GCATGCCCGT GCTCGACGGG
TTCAGTGCAA CCGCCGCCAT CCGCGCCCGC GAGGCGCGCG ACGGCGCCGG GCGCGTGCCG
ATCGTCGCCC TCACCGCCCA CGTCGTCGGC GAGGGAGCCG ATTCCTGGCG GACGGCCGGC
ATGGACGGCA TGCTCGCCAA GCCGTTCACC CTGGCGCAGC TCGGGGCCGT GCTGGCGCAG
CATCTGACGG CGGCCGGCGG CCACGCCACG CAGACCGTGC CGTCGCAGAG GCCGGCGGCG
CAGGCTTCGG AAGACGCCCT GCTCGACGAG CCGACGCTCG CCAATCTCGA GGAACTCGGC
GACCGGGACT TCCTGGCGCG CATCCTCCGG CTCTACGTCG CCCAGGCGCC GCAGGCCCTC
ACGGAGCTGG ACGCCGCCCT CGCCAGCGGC GATGCCCTGG CCCTGTCCCG CGCCGCCCAC
AGCCTCAAGT CGATGAGCGC CAATATCGGG GCGGTGCAGC TCAAGGACCG GGTGGGCGCG
ATCGAGCGGG CGGCGCGCGA CGGCCATCCG GCCGGTGGCC TGGCCTCCCT CGCCGACGCG
GTGTCCGGCC TGAGCCCCCT GCTCGTCCGC ACGCTGGACG CGCTCCGTCT CCGCCTGGAG
ATGCCCGACG AGGACGCGCA AGGCGGCGAG GCAACGACCG GTGGCCGGCG CGCGGTCGGC
TGA
|
|---|
| Protein sequence | MRVPFPNPIR SLSGRLALAV AGAVALALLL LTGLSTWREV ERYAAAKREL LRMTAQILAA
SAAQATAQGD ESAAQSSLRA IAHGQALIYA AVERGDGAIL AEQGIGLRLA NDIDLDQGSV
SPLALMTTRT LRVSVPILEN ARPIGRVVLV SDNRDLAGRI AEVGLTAALA GMLALALGLA
VSMGLQRGVT RPLAALARTM DGVRLGHDYT KRAEAAGSRE VGALAASFND LLQAVNERDR
AIARHNAGLE EEIRLRTHDL IEAKQSADEA NAAKSVFLAT MSHEIRTPMN GMLVMAELLA
SAELPPRQQR YAQVIARSGQ SLLAIINDIL DFAKVESGRL EVERIPLSPR DVADTVVTLF
AERAASAGLD LAAQIDGDVP RSLLGDPVRL GQVLGNFVSN ALKFTAAGHV LVRMTMEASA
SGPVLCIAVS DTGIGIPEDR LAGIFTAFTQ ADQSIARRFG GTGLGLSIAE RLIAAMGGCV
GVESRLGAGS TFWARIPADG ADPAAPPVRR APAVPAAIRF DAVGGATRIA LAADLEAAGF
RPVEAGDGHW FIDAAALSAS GRRPEGAGRV IALVPLGDAS GTGLLRAGLA DAVLRRPLTQ
AEWRPLLAAL AEGVPLPVEV LAETSGAGDG TAASLPSFAA ARVLLADDSA VNREVASEAL
GRFGVRDIVC VEDGQAAVEA AAAARFDLVL MDGSMPVLDG FSATAAIRAR EARDGAGRVP
IVALTAHVVG EGADSWRTAG MDGMLAKPFT LAQLGAVLAQ HLTAAGGHAT QTVPSQRPAA
QASEDALLDE PTLANLEELG DRDFLARILR LYVAQAPQAL TELDAALASG DALALSRAAH
SLKSMSANIG AVQLKDRVGA IERAARDGHP AGGLASLADA VSGLSPLLVR TLDALRLRLE
MPDEDAQGGE ATTGGRRAVG
|
|---|
| |