Gene Mpop_3877 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagMpop_3877 
Symbol 
ID6312315 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameMethylobacterium populi BJ001 
KingdomBacteria 
Replicon accessionNC_010725 
Strand
Start bp4123164 
End bp4123928 
Gene Length765 bp 
Protein Length254 aa 
Translation table11 
GC content73% 
IMG OID642652579 
ProductABC transporter related 
Protein accessionYP_001926539 
Protein GI188583094 
COG category[E] Amino acid transport and metabolism 
COG ID[COG0410] ABC-type branched-chain amino acid transport systems, ATPase component 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones18 
Plasmid unclonability p-value
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones24 
Fosmid unclonability p-value0.221149 
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGAGCGCGC CCTTCCTCGA CGTCGAGGGC ATCGAGGCGG TCTACGGCGC CTCGATCCTC 
GCCTTGCGCG ACGTGTCGCT GAGCGTGGCG AGCGGCGAGA TCGTCGCGCT GATCGGCCCC
AACGGCGCCG GCAAGACCAC GACGCTGCGG GCGGTCTCGA ACCTGCTCGG CGCCCAGCGC
GGCAGCCTGC GGCGCGGCGC CATCCGCTGG CAGGGCGAGG CGACCGGGCG CCTCGATCCG
GCCGACCTCG TCGCCCGCGG CATCGTGCAG GTGCTGGAGG GCCGCCACGT CTTCGGTCAG
CTCACGGTGG AGGAGAATCT GCTCACCGGC GGCTATCTCC GCCGTCCGAG CCGGCGCCAG
CTCACTGACG ATCTGGAGCG GATCTACGCG TGGTTCCCGC GCCTGAAGCA GCGGCGCGGG
GCCAAGGCCG GCCTCACCTC CGGCGGCGAG CAGCAGATGG TGGCGATCGG GCGCGCCCTG
ATGACCCGGC CGACGCTGCT GCTCCTCGAC GAGCCCTCCA TGGGGCTCGC GCCGATCATC
GTCGCCGAGA TCTTCGAGAT CGTCGCCCGC CTGAACCGCG AGGAGGGCGT CAGCGTCCTC
GTCGCCGAGC AGAGCGCCAA CCTCGTGCTC GACCATGCCC ACCGCGCGGT GGTGCTGGAG
AGCGGGCGCG TGGTCGCCTC CGGCTCCAGC GCGGAACTCG CCGCGAGCGG CCGGCTCGGC
GCCCTCTACC TCGGCGCCGA CGCGAACCCT TCCACACGCC ACTGA
 
Protein sequence
MSAPFLDVEG IEAVYGASIL ALRDVSLSVA SGEIVALIGP NGAGKTTTLR AVSNLLGAQR 
GSLRRGAIRW QGEATGRLDP ADLVARGIVQ VLEGRHVFGQ LTVEENLLTG GYLRRPSRRQ
LTDDLERIYA WFPRLKQRRG AKAGLTSGGE QQMVAIGRAL MTRPTLLLLD EPSMGLAPII
VAEIFEIVAR LNREEGVSVL VAEQSANLVL DHAHRAVVLE SGRVVASGSS AELAASGRLG
ALYLGADANP STRH