Gene Mpop_3876 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagMpop_3876 
Symbol 
ID6312314 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameMethylobacterium populi BJ001 
KingdomBacteria 
Replicon accessionNC_010725 
Strand
Start bp4121803 
End bp4123167 
Gene Length1365 bp 
Protein Length454 aa 
Translation table11 
GC content68% 
IMG OID642652578 
Producthypothetical protein 
Protein accessionYP_001926538 
Protein GI188583093 
COG category[E] Amino acid transport and metabolism 
COG ID[COG0683] ABC-type branched-chain amino acid transport systems, periplasmic component 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones12 
Plasmid unclonability p-value
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones23 
Fosmid unclonability p-value0.181447 
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGCCCCGCC TGTCCCGCGC CCTGCGCGCC GCCGCCCTCG CGGCAAGCCT GATCGCCTCG 
TCAAGCCTCG TCCCAGCGGC GGAAGCGGCC GCTCCGTCGG CCAAGCAGTA CATCCCGATC
GCCACCTACC GCGTCGGCGC CTACGCCTCG TCCGGCACGC CGGTCTGGGG CGGGACCATC
GATTACCTGC GCTACATCAA CGAGGTCGAG GGCGGCATCA ACGGCGTCAA GCTGGTCTGG
GAAGAGTGCG AGACCGAGTG GGCGGTCGAG AAGGGCGTCG AGTGCTACGA GCGGCTCAAA
GGCGGCCGCG AGGGCTCGCC GGCGCCGCTG TTCCTGCCGC ACGGCGACCC GATCTCGAAG
GCGCTCACCG AGAAGTCGGT GGCCGACAAG ATCCCGCTGC TCACCACCGG CTACGGCCGC
ACCGAGGCCA TCGACGGGCG CGTCTTCCCC TACAGCTTCA CCGTGCTGTT CAGTTTCTGG
AGCGAGGCGT CCTCGGCCGT GAACTACATC GCCGAGCAGG TCGGGGGGAA GGACAAGCTC
AAGGGTCTCA AGATCGCGAC CGTCTACCAC GACTCGCCCT ACGGCAAGGA GACGCAGGTC
CCGCTCGATC TGCTGGCCAA GACCTACGGC TTCGAGAACA TCCAGATCGC GGTGCCCCAT
CCCGGCAACG ACCAGTCGGC GCAATGGGCG CGCATCCGCC AGATCAAGCC GGACTGGGTG
TTCCTGCGCG GCTGGGGCGT GATGACCCCG GTGGCGATCA AGACCGCGGC CAAGACCGGC
TTTCCCGTCG ACCATATCAT CGGCGGCATC TGGTCGGGCT CGGAGGAAGA CGTGCGGCCC
GCCGGCAGCG TCGGCAAGGG CTATCTCGCC ATCACCCCGT TCCCCGCCGG CTCCGAATTC
GGCATCCTGA AGAAGATCAA GGCGGCGATC GTCGATCAGG GCAAGAGCGA CCTGAAGGAC
CTCAAGAGCT TCGGCTCGGT CTACTACAAT TCCGGTGTCA TCGAGACGAT CATCGCGGTG
GAGGCGATCC GCACGGCGCA GGCCCGTTTC GGCCACCGCC CCCTCAACGG CGAGGAGACG
CAGTGGGGCC TGGAGCACCT CGTGCTCGAC GAGGCGCGCC TGAAGGAGCT CGGCGCGGAC
GGCCTCGTCC AGCCGCTGCG CCTCTCGGCC AAGGATCACG AGGGCGGCGG CGCCGGCAAG
GTGCTGCAAT GGGACGGCGC GAAGTGGACC ATCGTCTCGA ACGGCTGGGT CAAGTCCGAC
CGTGAGCTGC TCCTGCCGGT GATCTACGAG CGCGCGGCGG CCTATGCCCG GGAGAAGGGC
ATCACGCCCC GCTCCGAGGA CACGGCGGAG GCGGGCGCGA AATGA
 
Protein sequence
MPRLSRALRA AALAASLIAS SSLVPAAEAA APSAKQYIPI ATYRVGAYAS SGTPVWGGTI 
DYLRYINEVE GGINGVKLVW EECETEWAVE KGVECYERLK GGREGSPAPL FLPHGDPISK
ALTEKSVADK IPLLTTGYGR TEAIDGRVFP YSFTVLFSFW SEASSAVNYI AEQVGGKDKL
KGLKIATVYH DSPYGKETQV PLDLLAKTYG FENIQIAVPH PGNDQSAQWA RIRQIKPDWV
FLRGWGVMTP VAIKTAAKTG FPVDHIIGGI WSGSEEDVRP AGSVGKGYLA ITPFPAGSEF
GILKKIKAAI VDQGKSDLKD LKSFGSVYYN SGVIETIIAV EAIRTAQARF GHRPLNGEET
QWGLEHLVLD EARLKELGAD GLVQPLRLSA KDHEGGGAGK VLQWDGAKWT IVSNGWVKSD
RELLLPVIYE RAAAYAREKG ITPRSEDTAE AGAK