| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Mpop_3874 |
|---|
| Symbol | |
|---|
| ID | 6312342 |
|---|
| Type | CDS |
|---|
| Is gene spliced | No |
|---|
| Is pseudo gene | No |
|---|
| Organism name | Methylobacterium populi BJ001 |
|---|
| Kingdom | Bacteria |
|---|
| Replicon accession | NC_010725 |
|---|
| Strand | + |
|---|
| Start bp | 4119837 |
|---|
| End bp | 4120718 |
|---|
| Gene Length | 882 bp |
|---|
| Protein Length | 293 aa |
|---|
| Translation table | 11 |
|---|
| GC content | 70% |
|---|
| IMG OID | 642652576 |
|---|
| Product | inner-membrane translocator |
|---|
| Protein accession | YP_001926536 |
|---|
| Protein GI | 188583091 |
|---|
| COG category | [E] Amino acid transport and metabolism |
|---|
| COG ID | [COG0559] Branched-chain amino acid ABC-type transport system, permease components |
|---|
| TIGRFAM ID | |
|---|
| 
|
Plasmid Coverage information |
| Num covering plasmid clones | 15 |
|---|
| Plasmid unclonability p-value | 1 |
|---|
| Plasmid hitchhiking | No |
|---|
| Plasmid clonability | normal |
|---|
| |
Fosmid Coverage information |
| Num covering fosmid clones | 23 |
|---|
| Fosmid unclonability p-value | 0.160659 |
|---|
| Fosmid Hitchhiker | No |
|---|
| Fosmid clonability | normal |
|---|
| |
Sequence |
| Gene sequence | ATGAGCTTCT TCCTGGAGAC GCTCGCGGGC GGTCTGCTCG CCGGCGTGAT GTACGCCCTC
GTCGCGATCG GCTTCGTGCT GATCTACAAG GCGTCGGGCG TGTTCAACTT CGCGCAAGGG
GCGATGGTGC TGTGCGCCGC GCTCACCTTC GTGACGCTCA CCGAGCGCGA CGTGCCGTTC
TGGCTCGCCG GCCTGATCAC GCTGGCGATC ATGGTGACGC TGGCGGTCGC CGTCGAGCGG
ATCGTGCTGC GGCCGCTCGT GAACCGCTCG CAGATCACGC TGTTCATGGC GACGCTGGGC
CTGTCCTACG TGATCGAGGG CGGCTCGCAG TTCGTGATGG GCGCGAGCGT CCACGAGCTC
GATCTCGGCC TCAGCGACCT GCCGGTCGCG ATCGGACCGA TCCAGCTCAG CTCCTTCGAT
CTCGTGGCGG CGCTCACCGC CGGCGCGCTG GTGCTCGCCC TGTGGCTGTT CTTCGAGCGC
ACCCGCATCG GCGTCTCGCT GAGGGCGGTG GCCGACGATC CGCAGGCGGC GCTCTCCATC
GGCATCCGGC TGCCCGTGCT CTGGGCCACG GTCTGGGCGG TCGCCGGGTT CGTCGCGCTG
GTGGCGGGCC TGCTCTGGGG GGCGCGCCAG GGGGTGCAGT TCTCCCTCAC CTTCGTGGTG
CTGAAGGCGC TGCCGGTCCT CATCATCGGC GGCTTCACCT CGATCACCGG CGCCATCGTC
GGCGGCCTCA TCGTCGGCGC CGCCGACGCG CTCGCCGAGA TCTATCTCGG GCCGCTGCTC
GGCGGCTCGG TCTCCACCTG GTTCGCCTAC GCGCTCGCCG TCGCCTTCCT GCTGGTGCGT
CCGGCCGGGC TGTTCGGCGA GCGCGCCATC GAGAGAGTCT GA
|
|---|
| Protein sequence | MSFFLETLAG GLLAGVMYAL VAIGFVLIYK ASGVFNFAQG AMVLCAALTF VTLTERDVPF
WLAGLITLAI MVTLAVAVER IVLRPLVNRS QITLFMATLG LSYVIEGGSQ FVMGASVHEL
DLGLSDLPVA IGPIQLSSFD LVAALTAGAL VLALWLFFER TRIGVSLRAV ADDPQAALSI
GIRLPVLWAT VWAVAGFVAL VAGLLWGARQ GVQFSLTFVV LKALPVLIIG GFTSITGAIV
GGLIVGAADA LAEIYLGPLL GGSVSTWFAY ALAVAFLLVR PAGLFGERAI ERV
|
|---|
| |