Gene Mpop_3873 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagMpop_3873 
Symbol 
ID6312341 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameMethylobacterium populi BJ001 
KingdomBacteria 
Replicon accessionNC_010725 
Strand
Start bp4119042 
End bp4119812 
Gene Length771 bp 
Protein Length256 aa 
Translation table11 
GC content71% 
IMG OID642652575 
ProductABC transporter related 
Protein accessionYP_001926535 
Protein GI188583090 
COG category[E] Amino acid transport and metabolism 
COG ID[COG0411] ABC-type branched-chain amino acid transport systems, ATPase component 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones22 
Plasmid unclonability p-value
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones21 
Fosmid unclonability p-value0.0725392 
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGGCCGACC CGATCCTCGA ACTCTCCGAC GTGTCGCTCT CGTTCAAGGG GCTGAAGGCG 
ATCAACCATT TGAGCTTCTC GGTCGAGCGC GGCGAGATCT GCGCGCTGAT CGGCCCCAAC
GGCGCGGGCA AGTCCTCGGC CCTCAACATC CTCAACGGGG TCTACCGGGC CGATTCCGGC
CATGTCGCCT TCGATGGCCA GCGCCTGCGC TCGATCCGCC CCGGCGCGGC GGCTCGGCGC
GGGATCGGCC GCACCTTCCA GCACGCGGCC CTGTTCTCGG GGCTCAGCGT CCTCGACAAC
GTCCTGGCCG GGCTCGCCCG CCACAGCCGC ACCGGCCTCA TCGCGCACGC GCTGGGGCTG
CCGCGCGACG CCGCCGAGAC GCGCCGCTTC CGGGCCGCCG CCGAGGAGAC GCTGACTTTC
CTGGAACTCA CCCCCTACCG CGACCGCATC GTCGCGACGC TCTCCTACGG CATCCAGAAG
CGGGTCGATC TCGCCCGCGC CCTGGTGGCA CGGCCCACGC TGCTGCTGCT CGACGAGCCG
ATGGCCGGCA TGAACGGCGA GGAGAAGCGG GCCATGGCGC GCTTCATCGC GGCGGCGCGC
GCGGCGTTCG GCACCACCAT CGTGCTGATC GAGCACGATA TCGGCGTCGT CATGAGCCTG
TCGGACCACG TCGTGGTGCT CGATTACGGC CGCAAGGTCG GCGACGGCCC GCCCGACGCC
GTGCGCAACG ACCCGGCCGT GATCGCGGCC TATCTCGGCA AGCCGCATTG A
 
Protein sequence
MADPILELSD VSLSFKGLKA INHLSFSVER GEICALIGPN GAGKSSALNI LNGVYRADSG 
HVAFDGQRLR SIRPGAAARR GIGRTFQHAA LFSGLSVLDN VLAGLARHSR TGLIAHALGL
PRDAAETRRF RAAAEETLTF LELTPYRDRI VATLSYGIQK RVDLARALVA RPTLLLLDEP
MAGMNGEEKR AMARFIAAAR AAFGTTIVLI EHDIGVVMSL SDHVVVLDYG RKVGDGPPDA
VRNDPAVIAA YLGKPH