Gene Mpop_3866 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagMpop_3866 
Symbol 
ID6312334 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameMethylobacterium populi BJ001 
KingdomBacteria 
Replicon accessionNC_010725 
Strand
Start bp4110953 
End bp4112041 
Gene Length1089 bp 
Protein Length362 aa 
Translation table11 
GC content74% 
IMG OID642652568 
ProductAcyl-CoA dehydrogenase type 2 domain 
Protein accessionYP_001926528 
Protein GI188583083 
COG category[I] Lipid transport and metabolism 
COG ID[COG1960] Acyl-CoA dehydrogenases 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones12 
Plasmid unclonability p-value
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones18 
Fosmid unclonability p-value0.0222771 
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGGCCGCCA GCGCCCGCAT CGCTGAATCC CTCCCGCCCG ATATCGCAGG GATCGTGGCC 
GGGATCGTGC GCGAGCGCTT ACGCCCGCGC CTCGGCGCGA TCGATGCCGG AGCGTATCCC
GACGACATCC TGCGGGCGCT CGGGGCGGCC GGGGCGTATG GGCACCACGT CGACGGCACG
GCGGCGGGGC TCCTCGCCGC CATCGACGCG ATGACGGAGG CGGGTCAGGC CTGCCTCTCC
ACCGCCTTCT GCATGTGGTG CCAGGACGCC CTGGTCTGGT ATCTCGCCCG CGGCGACGAG
GCCGGCCCGC GCCGCCACCT CGCGGCCCTT GCCGCGGGCG CTGCGCTCGG CGGCACCGGA
CTGTCGAACC CGATGAAGGC GTTCTCCGGC ATCGAGCCGC TGGCGCTCCA GGGCGAGCGC
GTGGGCGACG GCTACCGGGT GCGCGGGCGC CTGCCCTGGG TCTCCAATCT GGGTCCCGGC
CACCGCTTCG CCGGCATCCT CTCGCTCCCC GACGGGCGGC GGGTGATGGG GCTGTTCGAG
GCCGGCGGCG AGGCCGTGTC GATCGCGGCC AATGCCCGCT TCGTCGCGCT CGAAGGCACC
GGCACCTACA CGGTGATGAT CCGCGACGGG CATCTGGCCG ACGAAGACGT CATCACCCAC
GACGCCGCCG CGTTCGTGCC GCGCATCCGC AACGGCTTCG TGCTGCTCCA GGCCGGGATG
GGGCTCGGGC TCGCCCGCGG GGTCGCTGCG CTGATGCGCG AGGACGAACG CGGGCGCGCG
AACGCGGCGT TCCTGCCGCT CGGGCCGGAG GCGATCGAGG CGCGGGCAGA CGCCCTGCGC
GCGCGCGTCG CCGTGTCGGC GCAGGCTCAC ACGGAGACCG ACCGCGCGAC CTTCCTGGAG
ACCCTGCGCT TGCGTCTCGA TATTTCCTGG CTGGCACTGG AGGCGGCGCA ATCGGCCATG
CTCCAGTTCG GCGCGCGCGG CTATCTGGAG GGGGCGGAGG CGTTCCGGCG CCTGCGCGAG
GCGCAGTTCG TGGCGATCGT CACGCCCTCG GTGAAGCACA TCACCACGGA ACTCGCGCGG
GGCGCCTGA
 
Protein sequence
MAASARIAES LPPDIAGIVA GIVRERLRPR LGAIDAGAYP DDILRALGAA GAYGHHVDGT 
AAGLLAAIDA MTEAGQACLS TAFCMWCQDA LVWYLARGDE AGPRRHLAAL AAGAALGGTG
LSNPMKAFSG IEPLALQGER VGDGYRVRGR LPWVSNLGPG HRFAGILSLP DGRRVMGLFE
AGGEAVSIAA NARFVALEGT GTYTVMIRDG HLADEDVITH DAAAFVPRIR NGFVLLQAGM
GLGLARGVAA LMREDERGRA NAAFLPLGPE AIEARADALR ARVAVSAQAH TETDRATFLE
TLRLRLDISW LALEAAQSAM LQFGARGYLE GAEAFRRLRE AQFVAIVTPS VKHITTELAR
GA