Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | Mpop_3866 |
Symbol | |
ID | 6312334 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Methylobacterium populi BJ001 |
Kingdom | Bacteria |
Replicon accession | NC_010725 |
Strand | - |
Start bp | 4110953 |
End bp | 4112041 |
Gene Length | 1089 bp |
Protein Length | 362 aa |
Translation table | 11 |
GC content | 74% |
IMG OID | 642652568 |
Product | Acyl-CoA dehydrogenase type 2 domain |
Protein accession | YP_001926528 |
Protein GI | 188583083 |
COG category | [I] Lipid transport and metabolism |
COG ID | [COG1960] Acyl-CoA dehydrogenases |
TIGRFAM ID | |
|
|
Plasmid Coverage information |
Num covering plasmid clones | 12 |
Plasmid unclonability p-value | 1 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
| |
Fosmid Coverage information |
Num covering fosmid clones | 18 |
Fosmid unclonability p-value | 0.0222771 |
Fosmid Hitchhiker | No |
Fosmid clonability | normal |
| |
Sequence |
Gene sequence | ATGGCCGCCA GCGCCCGCAT CGCTGAATCC CTCCCGCCCG ATATCGCAGG GATCGTGGCC GGGATCGTGC GCGAGCGCTT ACGCCCGCGC CTCGGCGCGA TCGATGCCGG AGCGTATCCC GACGACATCC TGCGGGCGCT CGGGGCGGCC GGGGCGTATG GGCACCACGT CGACGGCACG GCGGCGGGGC TCCTCGCCGC CATCGACGCG ATGACGGAGG CGGGTCAGGC CTGCCTCTCC ACCGCCTTCT GCATGTGGTG CCAGGACGCC CTGGTCTGGT ATCTCGCCCG CGGCGACGAG GCCGGCCCGC GCCGCCACCT CGCGGCCCTT GCCGCGGGCG CTGCGCTCGG CGGCACCGGA CTGTCGAACC CGATGAAGGC GTTCTCCGGC ATCGAGCCGC TGGCGCTCCA GGGCGAGCGC GTGGGCGACG GCTACCGGGT GCGCGGGCGC CTGCCCTGGG TCTCCAATCT GGGTCCCGGC CACCGCTTCG CCGGCATCCT CTCGCTCCCC GACGGGCGGC GGGTGATGGG GCTGTTCGAG GCCGGCGGCG AGGCCGTGTC GATCGCGGCC AATGCCCGCT TCGTCGCGCT CGAAGGCACC GGCACCTACA CGGTGATGAT CCGCGACGGG CATCTGGCCG ACGAAGACGT CATCACCCAC GACGCCGCCG CGTTCGTGCC GCGCATCCGC AACGGCTTCG TGCTGCTCCA GGCCGGGATG GGGCTCGGGC TCGCCCGCGG GGTCGCTGCG CTGATGCGCG AGGACGAACG CGGGCGCGCG AACGCGGCGT TCCTGCCGCT CGGGCCGGAG GCGATCGAGG CGCGGGCAGA CGCCCTGCGC GCGCGCGTCG CCGTGTCGGC GCAGGCTCAC ACGGAGACCG ACCGCGCGAC CTTCCTGGAG ACCCTGCGCT TGCGTCTCGA TATTTCCTGG CTGGCACTGG AGGCGGCGCA ATCGGCCATG CTCCAGTTCG GCGCGCGCGG CTATCTGGAG GGGGCGGAGG CGTTCCGGCG CCTGCGCGAG GCGCAGTTCG TGGCGATCGT CACGCCCTCG GTGAAGCACA TCACCACGGA ACTCGCGCGG GGCGCCTGA
|
Protein sequence | MAASARIAES LPPDIAGIVA GIVRERLRPR LGAIDAGAYP DDILRALGAA GAYGHHVDGT AAGLLAAIDA MTEAGQACLS TAFCMWCQDA LVWYLARGDE AGPRRHLAAL AAGAALGGTG LSNPMKAFSG IEPLALQGER VGDGYRVRGR LPWVSNLGPG HRFAGILSLP DGRRVMGLFE AGGEAVSIAA NARFVALEGT GTYTVMIRDG HLADEDVITH DAAAFVPRIR NGFVLLQAGM GLGLARGVAA LMREDERGRA NAAFLPLGPE AIEARADALR ARVAVSAQAH TETDRATFLE TLRLRLDISW LALEAAQSAM LQFGARGYLE GAEAFRRLRE AQFVAIVTPS VKHITTELAR GA
|
| |