| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Mpop_3855 |
|---|
| Symbol | |
|---|
| ID | 6312352 |
|---|
| Type | CDS |
|---|
| Is gene spliced | No |
|---|
| Is pseudo gene | No |
|---|
| Organism name | Methylobacterium populi BJ001 |
|---|
| Kingdom | Bacteria |
|---|
| Replicon accession | NC_010725 |
|---|
| Strand | + |
|---|
| Start bp | 4102822 |
|---|
| End bp | 4104066 |
|---|
| Gene Length | 1245 bp |
|---|
| Protein Length | 414 aa |
|---|
| Translation table | 11 |
|---|
| GC content | 64% |
|---|
| IMG OID | 642652557 |
|---|
| Product | DegT/DnrJ/EryC1/StrS aminotransferase |
|---|
| Protein accession | YP_001926517 |
|---|
| Protein GI | 188583072 |
|---|
| COG category | [M] Cell wall/membrane/envelope biogenesis |
|---|
| COG ID | [COG0399] Predicted pyridoxal phosphate-dependent enzyme apparently involved in regulation of cell wall biogenesis |
|---|
| TIGRFAM ID | |
|---|
| 
|
Plasmid Coverage information |
| Num covering plasmid clones | 11 |
|---|
| Plasmid unclonability p-value | 1 |
|---|
| Plasmid hitchhiking | No |
|---|
| Plasmid clonability | normal |
|---|
| |
Fosmid Coverage information |
| Num covering fosmid clones | 27 |
|---|
| Fosmid unclonability p-value | 0.770577 |
|---|
| Fosmid Hitchhiker | No |
|---|
| Fosmid clonability | normal |
|---|
| |
Sequence |
| Gene sequence | ATGCAGATCG CTCCGCTTGA GACCGCCCGC GCGGTCGAAG ACGCTCGGCT GCCGGAGCTT
CCGGTGCAGG CGACCCTGCG CCGTCTGGAG CGGGAATTCG CGAGCCTCCT CGGCGCGACA
GGAGCCGAGG CGGAGAATGC GGACGAACCC GTCTTCGTCA CCCGCCCGTT CCTGCCGCCC
TTGGAGGAGT TCGAGCCGCT CCTGCGGCGG ATCTGGCAGA CGCGGATCCT CACCAATGGC
GGTCCGTTCC ATCGGGAACT GGAGGCGCAA CTCACCACGC ATCTCGGTGT GCCCCAGGTC
GCCCTGTTCA ACAACGCGAC TACCGCGCTG ATCGTCGCCC TGAGGGCGCT CGATCTTTCA
GGCGAGGTGA TCACAACACC CTACTCGTTC GTTGCGACCT CGCATGCGCT GCTCTGGAGT
GGCCTCACCC CCGTCTTTGT CGATATCAAC CCTGTGACGC TCAACCTCGA TCCGGCCCGG
ATTGAGGCCG CAATCACGCC GCGCACCACC GCGATCCTGC CGGTCCACTG CTACGGCCGC
CCCTGCGACG TCGAGGCGAT TGCGGAGATT GCAGCTCGGC ACAGGCTCAA AGTCATCTAC
GACGCCGCCC ATGCCTTCGG CGTGCGCCAC CGCGGCCGTA GCGTACTGAA TCACGGCGAC
CTGTCGGTCC TGAGCTTCCA TGCCACCAAG GTGTTCAACA CCTTCGAGGG CGGCGCCATC
GTCTGCGCCG ATCCGGCGAT GAAGGATCGG ATCGACAAGC TGAAGAACTT CGGTTTCGAC
GACGAGACCT CCGTCATCGG CGTCGGGCTC AACGGAAAGA TGAGCGAGCT GAACGCAGCG
TTCGGCCTCG TTCAGCTGAG ATACGTCGAA GAGGCAATGA GCGGGCGGCG GAAAGTCGAT
GCTGCCTACC GGAAAGGTTT GCAGACCATC ACCGGCATCC GCTGCCTCGA CGCGGCCGAG
GAAGAGACGA CTAACCACGC CTACTTCCCG ATCCTGATCG AACCCGACTA TCCAGTCAGC
CGCGATGCGC TCTACGACGC GCTCAAGCGC GTCGGCATCC ATCCGCGGCG CTATTTTTAT
CCCCTGATTT CGGACTTCCC GGCCTACCGG ACGCTGCCCA GCGCCCGACG CGAGAGGTTG
CCGATAGCGG CAGAGAGCGC AGAGCGGGTG CTCTGTCTAC CCATCTACCC CGATCTCGAT
CCGGGCATCG TGGCGCGGGT GATCGAAGTA ATCGCCGCCC AGTGA
|
|---|
| Protein sequence | MQIAPLETAR AVEDARLPEL PVQATLRRLE REFASLLGAT GAEAENADEP VFVTRPFLPP
LEEFEPLLRR IWQTRILTNG GPFHRELEAQ LTTHLGVPQV ALFNNATTAL IVALRALDLS
GEVITTPYSF VATSHALLWS GLTPVFVDIN PVTLNLDPAR IEAAITPRTT AILPVHCYGR
PCDVEAIAEI AARHRLKVIY DAAHAFGVRH RGRSVLNHGD LSVLSFHATK VFNTFEGGAI
VCADPAMKDR IDKLKNFGFD DETSVIGVGL NGKMSELNAA FGLVQLRYVE EAMSGRRKVD
AAYRKGLQTI TGIRCLDAAE EETTNHAYFP ILIEPDYPVS RDALYDALKR VGIHPRRYFY
PLISDFPAYR TLPSARRERL PIAAESAERV LCLPIYPDLD PGIVARVIEV IAAQ
|
|---|
| |