Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | Mpop_3791 |
Symbol | |
ID | 6312213 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Methylobacterium populi BJ001 |
Kingdom | Bacteria |
Replicon accession | NC_010725 |
Strand | - |
Start bp | 4033897 |
End bp | 4035375 |
Gene Length | 1479 bp |
Protein Length | 492 aa |
Translation table | 11 |
GC content | 68% |
IMG OID | 642652499 |
Product | PAS/PAC sensor hybrid histidine kinase |
Protein accession | YP_001926460 |
Protein GI | 188583015 |
COG category | [T] Signal transduction mechanisms |
COG ID | [COG0642] Signal transduction histidine kinase [COG2204] Response regulator containing CheY-like receiver, AAA-type ATPase, and DNA-binding domains |
TIGRFAM ID | [TIGR00229] PAS domain S-box |
| 

|
Plasmid Coverage information |
Num covering plasmid clones | 9 |
Plasmid unclonability p-value | 1 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
| |
Fosmid Coverage information |
Num covering fosmid clones | 21 |
Fosmid unclonability p-value | 0.107728 |
Fosmid Hitchhiker | No |
Fosmid clonability | normal |
| |
Sequence |
Gene sequence | ATGCTCTGCG TGGCCAACTT CGACGGCTGC TTCGTCAGCC TCAACCCGGC CTGGCGCCTG ACGCTCGGCT GGACCGAGGC CGAGATGAAG GCGCGCCCCT TCCTCGACTT CGTCCACCCC GATGACATCG CGGCCACGCT GGCGGCGGCC GAGGGCTTGG CGCGTGGGGA GGCGCAAACG ACCTTCGAGA ACCGCTACCG GCACCGGGAC GGCAGCCATG TCTGGTTGTC CTGGAATGCG GTGCCGCGCG ACGGTCTGAT CTACGCCTCG ACGCGCGACG TGACGGAAAC CAAAAGGCAG GCCGAGGCGC TCGCCAAAAC CGAGGAGGCG TTGCGGCAGT CGCAGAAGAT GGAGGCGGTC GGACAGCTCA CCGGGGGCTT GGCCCACGAC TTCAACAACT TGCTCGCGGG CATCTCCGGC TCGCTGGAGC TGATGCAGAC CCGCATGTCG CAAGGCAGGA TGGGCGACCT CGACCGCTAC ATGTCGGTGG CACAGGGGGC GGCCAAGCGC GCCGCGGCGC TGACGCATCG CCTGCTCGCT TTCTCCCGAC GCCAGACGCT CGACCCCAAG CCGGCGAACG TGAACCGGCT GGTCGCGGAC ATGGAGGAAC TCGTCCGGCG CACGGTCGGC CCGGCCATCC ACCTGGAGGT GGTAGGCCTC GCGGGTCTGT GGCCGGCGCT GATCGACGTC GGCCAGTTGG AAAATGCGTT GCTCAACCTC TGCATCAACG CGCGCGACGC CATGCCGGGC GGTGGTCGCA TTACCATCGA GACCGCCAAC AAGTGGATCG ACGAGGCCGG CTCCCGCCAG CACGACCTGC CACCCGGGCA GTATCTCAGC GTCTGCGTGA CCGACACCGG CACCGGCATG CCGCCAGACC TCGTCGACAA GGTGTTCGAG CCGTTCTTCA CCACCAAGCC CACCGGCGAG GGCACGGGCC TCGGTCTGTC TATGGTCTAC GGCTTCGCCC GCCAGTCCGG CGGACAGGTC CGAATCTATT CCGAGGTCGG CCAGGGCACG ACGGTCTGCC TCTACCTGCC GCGCCACTAC GGCGAGGCCG ACGAGGACGA CGTGACCCGG AGGCTCGCCG AGGTCGAGCG CGCCGGGCAG GGCGAGACGG TGCTCATCGT GGACGACGAG CCTTCGGTGC GCATGCTGGT GACCGAGGTG CTGGAGGATC TCGGCTACAC CGCCATCGAG GCCGCCGACA GCGTCGCCGG CCTGAAGGTG CTGCAGTCGG ACGTGCGCAT CGACCTCTTG GTGACGGATG TTGGCCTGCC CGGCGGCATG AACGGGCGCC AGATGGCGGA CGCAGGCCGC GAGCGGCGGC CGGACCTGAA GGTGCTGTTC ATCACCGGCT ACGCCGAGAA CGCGGTACTC GGGAACGGGT ACCTGCGGCC CGGCATGCAG GTCCTCACCA AGCCGTTCGT GCTGGAGACG CTCGCCACGC GCATCAAGGA CCTCATCGTC CAGGCTTGA
|
Protein sequence | MLCVANFDGC FVSLNPAWRL TLGWTEAEMK ARPFLDFVHP DDIAATLAAA EGLARGEAQT TFENRYRHRD GSHVWLSWNA VPRDGLIYAS TRDVTETKRQ AEALAKTEEA LRQSQKMEAV GQLTGGLAHD FNNLLAGISG SLELMQTRMS QGRMGDLDRY MSVAQGAAKR AAALTHRLLA FSRRQTLDPK PANVNRLVAD MEELVRRTVG PAIHLEVVGL AGLWPALIDV GQLENALLNL CINARDAMPG GGRITIETAN KWIDEAGSRQ HDLPPGQYLS VCVTDTGTGM PPDLVDKVFE PFFTTKPTGE GTGLGLSMVY GFARQSGGQV RIYSEVGQGT TVCLYLPRHY GEADEDDVTR RLAEVERAGQ GETVLIVDDE PSVRMLVTEV LEDLGYTAIE AADSVAGLKV LQSDVRIDLL VTDVGLPGGM NGRQMADAGR ERRPDLKVLF ITGYAENAVL GNGYLRPGMQ VLTKPFVLET LATRIKDLIV QA
|
| |