Gene Mpop_3784 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagMpop_3784 
Symbol 
ID6312197 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameMethylobacterium populi BJ001 
KingdomBacteria 
Replicon accessionNC_010725 
Strand
Start bp4029140 
End bp4029937 
Gene Length798 bp 
Protein Length265 aa 
Translation table11 
GC content60% 
IMG OID642652493 
ProductABC transporter related 
Protein accessionYP_001926454 
Protein GI188583009 
COG category[P] Inorganic ion transport and metabolism 
COG ID[COG1116] ABC-type nitrate/sulfonate/bicarbonate transport system, ATPase component 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones14 
Plasmid unclonability p-value
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones22 
Fosmid unclonability p-value0.15686 
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGAATACGC CGGCATCGAC TTCATCGGCT CAACCCGTCG TTGACCCCCA CATCACCATC 
CGAGGCCTCG CCAAGCGGTT TCGGGGCCAG ACCGTCTACG ATCGCTTCGA CCTCGATCTG
CCGCGTGGAG CCATCGTTTC CGTGTTCGGG CCGAACGGCT GCGGGAAGAG TACTTTGATC
AACATGATCT CGGGCATCAT GCCGCGTGAC GGGGGCGAGA TACTGTTTGA CGGGCGTCCG
GTCTCGGAAG CCCGCATCGG ATATGTATTC CAGAACTATC GGGAAGCCCT TTTCCCCTGG
ATGAGAGCTC GGGACAACGT CGTGTATCCG CTCATGCTGA TGGGCGTCGC GCCTGCAGAA
CAGCGTCGGC GGATCGAACG CTTGGCGGCA GCGTTCGATC TCAAGTTCGA CCTTGATCGG
TACCCCTACG AATTGTCGGG AGGACAGCAG CAGACGGTCT CGATCATGCG CGCCCTGGTG
ACCGAGCCGG AGGTGCTGTT CCTCGACGAG CCCTTTTCGG CACTCGACTA CGAGATGACG
CTAACGATGC GCGACCAGCT TCAGAAGGTG CTCGGTCAGA CGCGAACTAC CGCGCTTCTG
GTAAGCCACG ACCTCGATGA GGCGATCTAT CTGGCGGACA AGGTCCTTCT TCTGACCCGC
AGGCCGACGA GGATTGCAGC CTATCTCGAC GTGTCCCTCG CTCGTCCCCG CGTCCCTGAA
GCGACGACAG AGCCGGAATT CATGGCGCTG AAGGCGAAGG CTCTGGCAAT CTTCCAAGAA
TCCATCCGGG CCAACTAA
 
Protein sequence
MNTPASTSSA QPVVDPHITI RGLAKRFRGQ TVYDRFDLDL PRGAIVSVFG PNGCGKSTLI 
NMISGIMPRD GGEILFDGRP VSEARIGYVF QNYREALFPW MRARDNVVYP LMLMGVAPAE
QRRRIERLAA AFDLKFDLDR YPYELSGGQQ QTVSIMRALV TEPEVLFLDE PFSALDYEMT
LTMRDQLQKV LGQTRTTALL VSHDLDEAIY LADKVLLLTR RPTRIAAYLD VSLARPRVPE
ATTEPEFMAL KAKALAIFQE SIRAN