Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | Mpop_3767 |
Symbol | |
ID | 6312170 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Methylobacterium populi BJ001 |
Kingdom | Bacteria |
Replicon accession | NC_010725 |
Strand | + |
Start bp | 4013070 |
End bp | 4014263 |
Gene Length | 1194 bp |
Protein Length | 397 aa |
Translation table | 11 |
GC content | 62% |
IMG OID | 642652479 |
Product | Extracellular ligand-binding receptor |
Protein accession | YP_001926440 |
Protein GI | 188582995 |
COG category | [E] Amino acid transport and metabolism |
COG ID | [COG0683] ABC-type branched-chain amino acid transport systems, periplasmic component |
TIGRFAM ID | |
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Plasmid Coverage information |
Num covering plasmid clones | 10 |
Plasmid unclonability p-value | 1 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
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Fosmid Coverage information |
Num covering fosmid clones | 23 |
Fosmid unclonability p-value | 0.191669 |
Fosmid Hitchhiker | No |
Fosmid clonability | normal |
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Sequence |
Gene sequence | ATGGTTGCGC CAAAGTATTA TCGCCGACTA TTTTTGATCG TGCCACTGGC TTTCACGATT CCCGGCTCGG CGCTTGCCCA GCAGGAGCCC TGCATCGGCA ACTCTGCCGC CATCACCGGC CCGGCGGCCT TCACCGGCCA AGCCATCAGA ATGGGCGCCG AGATCGCCCT TGAGGAGATC AATGCCAAGG GCGGTGTCCT CGGCAAGCCT CTGCGCTTCG TCCAGTATGA CGACGCCGGA ACACCGCCAC GCGGCGTCGA CAACACCCGG CGCGTCGCGC TGGCCGATAA GTGTGTCGTC ATCCTCGGCG GTTACCACTC CACCGTTTCG GTGGCTCAGG TCGAGCCGGT CCATGCCATC GGCATTCCGT TCGTCGGCGT GCTCGCAGCC AACACACAGG CCATCGAGAA CGGCCGTAAT CCGAACTACA TGTTCCGGGT ATCGGCCAAG GACAAATGGG TCGCCCGCTT CCTCGTCGAG CAGGCAGCGA AGGTCTCGAA GACCGGAAAG ATCGCTTTCT TCTATGAGAA TACAGGGTGG GGCAACGGTG CCGTGCCGGA TGTGAAGGCG GCGACCGCAA AGGCCGGAAA GGAACTGGTC GCCACGGAGA CCTTCAACTG GAACGATCAG GACATGACCG CGCAGGCGAT CCGCGCGCGG GATTCGGGTG CCGACGTTGC CCTGTTCTGG GCTCTCGACC GCGAGGGCAA CCAACTCGTC CGCTCCATGG ACAAGGTCGG CTACAAGCCC ACCATCATCG GCGCCTGGGG CATCGCCGGC AATCTCGGCG AACTGGCCGG CCCGCTCGCC AATGGCGTCC AGGTCGTGCA GACCTACAGC TTCATGGGCG ACCTCGACCA TAAAGGCCAA GCGCTCTGGC AGAAGATCCA GACGAAGTAC GGCCTGAAGG ATCCGTCGCA GATCAAGATG GGCTCCGGCA TCGCCAACAC CTACGACGCC GTGCACATCG TGGCCCAGGC CATTGAGAAG GCCGGTGCCT ACGATTGGAA GAAGGTCCGC GAGGCGCTTT ATCAAGTCAG ATATGAGGGC TTGGTCGCGA AATACGATCC GGCCTTCGAT TCCTCTGACC CGGAACGCCA GGACGCAATT CTGCCGAGCG AATACAAGCT GACGGTCTGG TCCGACGGCA AGCTCCTGCC GATTGCGCAG ACCCCCTACG GCAGAACGAA CTGA
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Protein sequence | MVAPKYYRRL FLIVPLAFTI PGSALAQQEP CIGNSAAITG PAAFTGQAIR MGAEIALEEI NAKGGVLGKP LRFVQYDDAG TPPRGVDNTR RVALADKCVV ILGGYHSTVS VAQVEPVHAI GIPFVGVLAA NTQAIENGRN PNYMFRVSAK DKWVARFLVE QAAKVSKTGK IAFFYENTGW GNGAVPDVKA ATAKAGKELV ATETFNWNDQ DMTAQAIRAR DSGADVALFW ALDREGNQLV RSMDKVGYKP TIIGAWGIAG NLGELAGPLA NGVQVVQTYS FMGDLDHKGQ ALWQKIQTKY GLKDPSQIKM GSGIANTYDA VHIVAQAIEK AGAYDWKKVR EALYQVRYEG LVAKYDPAFD SSDPERQDAI LPSEYKLTVW SDGKLLPIAQ TPYGRTN
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