| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Mpop_3720 |
|---|
| Symbol | |
|---|
| ID | 6312116 |
|---|
| Type | CDS |
|---|
| Is gene spliced | No |
|---|
| Is pseudo gene | No |
|---|
| Organism name | Methylobacterium populi BJ001 |
|---|
| Kingdom | Bacteria |
|---|
| Replicon accession | NC_010725 |
|---|
| Strand | + |
|---|
| Start bp | 3969452 |
|---|
| End bp | 3970012 |
|---|
| Gene Length | 561 bp |
|---|
| Protein Length | 186 aa |
|---|
| Translation table | 11 |
|---|
| GC content | 70% |
|---|
| IMG OID | 642652438 |
|---|
| Product | transposase, IS204/IS1001/IS1096/IS1165 family protein |
|---|
| Protein accession | YP_001926399 |
|---|
| Protein GI | 188582954 |
|---|
| COG category | [L] Replication, recombination and repair |
|---|
| COG ID | [COG3464] Transposase and inactivated derivatives |
|---|
| TIGRFAM ID | |
|---|
| 
|
Plasmid Coverage information |
| Num covering plasmid clones | 17 |
|---|
| Plasmid unclonability p-value | 1 |
|---|
| Plasmid hitchhiking | No |
|---|
| Plasmid clonability | normal |
|---|
| |
Fosmid Coverage information |
| Num covering fosmid clones | 35 |
|---|
| Fosmid unclonability p-value | 1 |
|---|
| Fosmid Hitchhiker | No |
|---|
| Fosmid clonability | normal |
|---|
| |
Sequence |
| Gene sequence | ATGCAGCTCT GGCGCGAGTT GCGGTCCCGC GGCTTCGCTG GCACCGTCAA GCAGATCAGA
CGCTGGCTGC CCGAGCGGCG CACCCGCCCT GCCAGGACCA CGATCCGGCG TCTCCAGACG
CCGCTGCCGA TGGCGCCCGC CGCACCGCCG CCGCTACCCT CACCGAAGCA GTTGTCGTGG
CAACTCCTGC GCGAGCCGCA CGATCTCGCT GCTGCGGTCG CACGCGTGCT GCAGGATGAC
GAGGCTGCCA AGGTCGCTGA CCTCGGCCGA CGATTCTGTC GGATCGTCTG CAGCCGCTGC
GGCAGCGCGC CGGCCGAGCT TGGCATCGCC CCGCCCTTCG ACGCTTGGCT GAGCGATGCC
CGAGCCTGCG GTGTGCAGGT GGTCGAGAGC TTCGCCAGCG GCCTCGCTCA GGATGGAGCC
GCTGTTCATG CCGGCCTCCG CCTGCCCTGG ATTAGCGGAC AGGCCGAGGG GCAGGTCAAC
CGGCTCAAGC TCCTCAAGCG CGCCATATAC GGCCAGGCCA AGCTCGACCT CCTGCGCCGC
CGCTTCCTCC TCGCAGCGTG A
|
|---|
| Protein sequence | MQLWRELRSR GFAGTVKQIR RWLPERRTRP ARTTIRRLQT PLPMAPAAPP PLPSPKQLSW
QLLREPHDLA AAVARVLQDD EAAKVADLGR RFCRIVCSRC GSAPAELGIA PPFDAWLSDA
RACGVQVVES FASGLAQDGA AVHAGLRLPW ISGQAEGQVN RLKLLKRAIY GQAKLDLLRR
RFLLAA
|
|---|
| |