Gene Mpop_3668 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagMpop_3668 
Symbol 
ID6311944 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameMethylobacterium populi BJ001 
KingdomBacteria 
Replicon accessionNC_010725 
Strand
Start bp3914144 
End bp3914872 
Gene Length729 bp 
Protein Length242 aa 
Translation table11 
GC content66% 
IMG OID642652390 
Productacetoacetyl-CoA reductase 
Protein accessionYP_001926352 
Protein GI188582907 
COG category[I] Lipid transport and metabolism
[Q] Secondary metabolites biosynthesis, transport and catabolism
[R] General function prediction only 
COG ID[COG1028] Dehydrogenases with different specificities (related to short-chain alcohol dehydrogenases) 
TIGRFAM ID[TIGR01829] acetoacetyl-CoA reductase 


Plasmid Coverage information

Num covering plasmid clones10 
Plasmid unclonability p-value0.814536 
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones25 
Fosmid unclonability p-value0.461474 
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGGCTCAGG AACGCGTCGC CCTCGTCACG GGTGGAACGC GCGGCATCGG CGCCGCGATC 
TCGAAGCGCC TGAAGGACAA GGGCTACAAG GTCGCCGCCA ATTACGGCGG CAACGACGAG
GCGGCCAACG CCTTCAAGGC CGAGACCGGC ATTCCGGTGT TCAAGTTCGA CGTGGGCGAC
CTCGCGAGCT GCGAGGCCGG CATCAAGGCG ATCGAGGCCG AGGTCGGGCC GATCGACATC
CTGGTGAACA ATGCCGGCAT CACCCGCGAC GGCGCCTTCC ACAAGATGAC CTTCGAGAAG
TGGCAGGCGG TCATCAAGAC CAACCTCGAC TCGATGTTCA CCTGCACCCG TCCGCTGATC
GAGGGTATGC GCTCGCGCAA TTTCGGGCGC ATCATCATCA TCTCGTCGAT CAACGGCCAG
AAGGGCCAGG CCGGCCAGAC CAACTACTCG GCGGCCAAGG CCGGCGTGAT CGGCTTCGCC
AAGGCGCTGG CGCAGGAGAG CGCGTCGAAG GGCGTGACCG TCAACGTGGT GGCCCCCGGC
TACATCGCCA CCGAGATGGT GATGGCGGTG CCGGAGGATA TCCGCAACAA GATCATCTCG
ACGATCCCGA CCGGCCGCCT CGGCGAGGCC GACGAGATCG CCCACGCGGT CGAGTATCTC
GCCAGCGACG AGGCCGGCTT CGTCACCGGC TCGACCCTGA CGATCAACGG CGGTCAGCAC
TTCGTCTGA
 
Protein sequence
MAQERVALVT GGTRGIGAAI SKRLKDKGYK VAANYGGNDE AANAFKAETG IPVFKFDVGD 
LASCEAGIKA IEAEVGPIDI LVNNAGITRD GAFHKMTFEK WQAVIKTNLD SMFTCTRPLI
EGMRSRNFGR IIIISSINGQ KGQAGQTNYS AAKAGVIGFA KALAQESASK GVTVNVVAPG
YIATEMVMAV PEDIRNKIIS TIPTGRLGEA DEIAHAVEYL ASDEAGFVTG STLTINGGQH
FV