| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Mpop_3662 |
|---|
| Symbol | |
|---|
| ID | 6311884 |
|---|
| Type | CDS |
|---|
| Is gene spliced | No |
|---|
| Is pseudo gene | No |
|---|
| Organism name | Methylobacterium populi BJ001 |
|---|
| Kingdom | Bacteria |
|---|
| Replicon accession | NC_010725 |
|---|
| Strand | + |
|---|
| Start bp | 3908980 |
|---|
| End bp | 3909783 |
|---|
| Gene Length | 804 bp |
|---|
| Protein Length | 267 aa |
|---|
| Translation table | 11 |
|---|
| GC content | 73% |
|---|
| IMG OID | 642652384 |
|---|
| Product | Cof-like hydrolase |
|---|
| Protein accession | YP_001926346 |
|---|
| Protein GI | 188582901 |
|---|
| COG category | [R] General function prediction only |
|---|
| COG ID | [COG0561] Predicted hydrolases of the HAD superfamily |
|---|
| TIGRFAM ID | [TIGR00099] Cof subfamily of IIB subfamily of haloacid dehalogenase superfamily
[TIGR01484] HAD-superfamily hydrolase, subfamily IIB |
|---|
| 
|
Plasmid Coverage information |
| Num covering plasmid clones | 8 |
|---|
| Plasmid unclonability p-value | 0.309394 |
|---|
| Plasmid hitchhiking | No |
|---|
| Plasmid clonability | normal |
|---|
| |
Fosmid Coverage information |
| Num covering fosmid clones | 23 |
|---|
| Fosmid unclonability p-value | 0.211606 |
|---|
| Fosmid Hitchhiker | No |
|---|
| Fosmid clonability | normal |
|---|
| |
Sequence |
| Gene sequence | ATGGACATCG CCCTCGTCGT CTCCGATGTC GACGGAACCC TCGTCACCGA CGACAAGCGG
CTGACACCGG CCGCCATCGC GGCGGTGCGG CGGCTCGGCA CGGCGGGAAT CGGCTTCACC
CTGGCCTCCA GCCGCCCGCC GGTCGGTCTG CGCTCCCTTG CCGAGGCGCT CGACCTGCGG
CTGCCGCTGG GCGCCTTCAA CGGCAGCACC GTCTGCACGC CCGACCTCCG GCCGATCTCG
GAGCGGCTGA TCCCCGAGGC GGTCGCCCGC GCGGCGGCCA CCCGCCTCGA CGCGGCCGGG
ATCGACGTGT GGGTGTTCGC CGACGGCGCC TGGAACCTGC GCAATCCGCA GGCGCCCTAT
ACCGACCTCG AGCGCCGCAC CCTGCAGACC GAGCCGCACG TGGTGCCGGA CCTGTCAGCC
CTGCTCGGTC GGGCGGCCAA GATCGTGGGT GTGAGCCGCG ACCATGCCGG GCTCGCGCGG
CTGGAGGAGG CGCTCGCGGC GGAGCTGGAC GGGCGGGCCG CCGTGCATTG CTCGCAGCCC
TACTACCTCG ACGTGACGCC GCCCGGCATC GACAAGGGCA GCTTCGTCGC CGGTCTCGGG
CGGCAGCTCG GCATTCCGCG GGAGCGAATC GCCACGCTGG GCGATGCGGC CAACGACGTC
GCCCTGTTCC GCGAGAGCGG ATTGTCGATC GCCATGGGCA ACGCCGCCCC CGCCGTGCAG
CGGGCGGCCT CGGCCGTGAC CGCGGACAAC AACGAGGACG GTTTCGCCCG CGCGATCAAC
CGGTTCGTGT TCGGGGACAC CTGA
|
|---|
| Protein sequence | MDIALVVSDV DGTLVTDDKR LTPAAIAAVR RLGTAGIGFT LASSRPPVGL RSLAEALDLR
LPLGAFNGST VCTPDLRPIS ERLIPEAVAR AAATRLDAAG IDVWVFADGA WNLRNPQAPY
TDLERRTLQT EPHVVPDLSA LLGRAAKIVG VSRDHAGLAR LEEALAAELD GRAAVHCSQP
YYLDVTPPGI DKGSFVAGLG RQLGIPRERI ATLGDAANDV ALFRESGLSI AMGNAAPAVQ
RAASAVTADN NEDGFARAIN RFVFGDT
|
|---|
| |