| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Mpop_3637 |
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| Symbol | |
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| ID | 6311802 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Methylobacterium populi BJ001 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_010725 |
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| Strand | - |
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| Start bp | 3883716 |
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| End bp | 3885308 |
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| Gene Length | 1593 bp |
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| Protein Length | 530 aa |
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| Translation table | 11 |
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| GC content | 68% |
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| IMG OID | 642652359 |
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| Product | phytoene desaturase |
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| Protein accession | YP_001926321 |
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| Protein GI | 188582876 |
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| COG category | [Q] Secondary metabolites biosynthesis, transport and catabolism |
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| COG ID | [COG1233] Phytoene dehydrogenase and related proteins |
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| TIGRFAM ID | [TIGR02734] phytoene desaturase |
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Plasmid Coverage information |
| Num covering plasmid clones | 5 |
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| Plasmid unclonability p-value | 0.197726 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | 19 |
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| Fosmid unclonability p-value | 0.0326307 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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Sequence |
| Gene sequence | TTGCTGCAGT CGCGGGAAGG TTTGCGTACC CTGTCGGGCC GCCGCGTCGT CGTCGTCGGG
GCCGGCCCCG GTGGGCTCGC CAGCGCGCTG CTCCTGGCCA AGGCCGGGCT GCATGTGACG
GTGATCGAGC GCGACGACGT CGTCGGCGGG CGCACCAAGA CCGTCGAGGC GCCGGGCGGC
TACCGCTTCG ACATCGGCCC GACCTTCTTC CTGTATCCGC AGATCCTCGC CGACATCTTC
GAATCCTGCG GCGAGCGCCT GGAGGACCAT GTCAGGCTGG AGCGGCTCGA CCCGCAATAC
AACCTCGTCT TCGAGGGCGA GGACGGCGTC TCGGGCCAGA TCCGCGCCAC CGGCGACGTG
CCGCGGCTCA AGGAGGAGAT CGCCCGTCTC GCCCCCGCCG ACGCGGAGAA CGTGGAGAAG
TTCTTCGCCG AGAACCGGAC CAAGCTGAAC TACTTCAAAC CGGTGCTGGA GCAGCCCTTC
GACAACATCC TGTCGATGGC GAGTCCGGCG ATGCTCGCGG CCCTGCCCCA TCTCCATCCC
GGCCGCAGCG TGGACCGGGA TCTCAGGCGC TATTTCGCCG ACCCGCGGGT GCGCCTCGCC
TTCTCGTTCC AGACCAAATA TCTCGGGATG AGCCCCTTCC GCTGCCCGAG CCTGTTCACG
ATCCTCTCGT TCCTCGAATA CGAGCACGGG GTCTATCACC CGGTCGGCGG CTGCGGCGCG
GTCTCGGAGG CGATGGCGGG CCTCGCCCGC CGCATGGGCG TCGATATCCG TCTCGGCCAA
TCGGTCGATC GGGTGCTGTT CGAGGGCAAG CGCGCCTGCG GCGTGGTCGT CGGCGGCGAG
ACCCTGAAGG CCGATGCGGT GGTCGTGAAC GGCGACTTCG CCAAGGTGAT CCGCGATCTC
GTGCCGGAGG AGCGGCGCCC GCGCTGGCGC GACGCCAAGA TCGGCAAGGC GCGCCTCTCC
TGCTCGACCT ACATGCTCTA CCTCGGGATC GAGGGCAAAA TGCCCGAGAG CCTCGGCCAT
CACACGATCC TGTTGTCCAA GGAATACGAG CGCAACATCA ACGAGATCAC CGGCGGCACT
CTGCCGATGC AGCCGTCGAT CTACGTGCAG CATGCGGGCT TCACCGATGG CGGCATGGCG
CCGCCCGGCC ACACCGCCCT CTACGTGCTG GTGCCGGTGC CCAATCTGAA GTCCGGCATC
AATTGGGAGG CGGTCGGGCC GAGCTACCGC AAGCTGGTGC TGGAGCGTCT GAAGCTCCTC
GGGATTCCCG ACATCGAGAG CCGCATCCGC TACGAGCGCG TGGTCGATCC CCGCGACTGG
CGCGACGCCT TCGCCGTGCA TGAGGGCGCG ACCTTCAATC TCGCCCACGA CCTGATGCAG
ATGCTGTGGT TCCGCCCGCA CAACCGCTTC GGGCCGGGGC TCTACCTCGT CGGCGGCGGC
ACCCATCCGG GCTCGGGCCT GCCCGTGATC TACGAGGGCG CGCGCATCTC TGCCCGGCTC
CTGATCGAGG ATCTCGCCAA GGAGCAGGCG CCCGCGATCC TGGCGGACCT GCCGACGACC
TCGCCCCTCG CCACGCAGGG CGATCCGAGT TGA
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| Protein sequence | MLQSREGLRT LSGRRVVVVG AGPGGLASAL LLAKAGLHVT VIERDDVVGG RTKTVEAPGG
YRFDIGPTFF LYPQILADIF ESCGERLEDH VRLERLDPQY NLVFEGEDGV SGQIRATGDV
PRLKEEIARL APADAENVEK FFAENRTKLN YFKPVLEQPF DNILSMASPA MLAALPHLHP
GRSVDRDLRR YFADPRVRLA FSFQTKYLGM SPFRCPSLFT ILSFLEYEHG VYHPVGGCGA
VSEAMAGLAR RMGVDIRLGQ SVDRVLFEGK RACGVVVGGE TLKADAVVVN GDFAKVIRDL
VPEERRPRWR DAKIGKARLS CSTYMLYLGI EGKMPESLGH HTILLSKEYE RNINEITGGT
LPMQPSIYVQ HAGFTDGGMA PPGHTALYVL VPVPNLKSGI NWEAVGPSYR KLVLERLKLL
GIPDIESRIR YERVVDPRDW RDAFAVHEGA TFNLAHDLMQ MLWFRPHNRF GPGLYLVGGG
THPGSGLPVI YEGARISARL LIEDLAKEQA PAILADLPTT SPLATQGDPS
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