| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Mpop_3626 |
|---|
| Symbol | |
|---|
| ID | 6311791 |
|---|
| Type | CDS |
|---|
| Is gene spliced | No |
|---|
| Is pseudo gene | No |
|---|
| Organism name | Methylobacterium populi BJ001 |
|---|
| Kingdom | Bacteria |
|---|
| Replicon accession | NC_010725 |
|---|
| Strand | - |
|---|
| Start bp | 3871748 |
|---|
| End bp | 3873553 |
|---|
| Gene Length | 1806 bp |
|---|
| Protein Length | 601 aa |
|---|
| Translation table | 11 |
|---|
| GC content | 73% |
|---|
| IMG OID | 642652348 |
|---|
| Product | Adenine deaminase |
|---|
| Protein accession | YP_001926310 |
|---|
| Protein GI | 188582865 |
|---|
| COG category | [F] Nucleotide transport and metabolism |
|---|
| COG ID | [COG1001] Adenine deaminase |
|---|
| TIGRFAM ID | [TIGR01178] adenine deaminase |
|---|
| 
|
Plasmid Coverage information |
| Num covering plasmid clones | 7 |
|---|
| Plasmid unclonability p-value | 1 |
|---|
| Plasmid hitchhiking | No |
|---|
| Plasmid clonability | normal |
|---|
| |
Fosmid Coverage information |
| Num covering fosmid clones | 19 |
|---|
| Fosmid unclonability p-value | 0.0436104 |
|---|
| Fosmid Hitchhiker | No |
|---|
| Fosmid clonability | normal |
|---|
| |
Sequence |
| Gene sequence | ATGACCGCCA GACCCCTCAA CCGCTTCTCC GTCGCCCCGT TGGCCGAGAT GACGCGGCGC
CTCGCCGAGG TCGCCTCCGG CCGCGCCGCG CCCGATCGCG TCATCACCGG GGCGCGGGTG
CTCTCGACCT ATTCCGAGCG CATCCTGCCC GATCGCGAGG TCTGGATCGC GGGCGGGCGC
ATCGCCGCGG TGAAGCCCGC GGGAAGCCAC CGCGGCGCGG CGCCGCGCTA CGATGCGGCC
GGCGGGCTGA TCGCGCCGGG GCTGGTCGAT CCGCACCTGC ACATCGAGAG CAGCATGATC
ACGGCGTGCG CCTATGCCGA GGCGGCGCTC GTCAACGGCA CCACCACCAT CGTCTGTGAC
AGCCACGAGA TCGGCAACGT GCTCGACGTG AACGGCGTCG AGTGGATGCT GGAGGATGCC
CGGGAGGCTC CGCTCAACAT CTTCCTCACC GTGCCGAGCA CGGTGCCCGC CACCACCCCG
GACCTCGAGA CCGCGGGCGG CGACCTGACG GCGGACAAGA TCGCGAGGCT GTTCGACGCT
TGGCCGGAAG CGATCGGCCT CGGCGAGAAG ATGGATTTCG TCGCGGTGGC CAGCGGCGAC
GCGCGGGCCC ACGCCATCCT CCGCGCCGCC CTGGAGCGGG GCCGCCCGGT CTCGGGCCAC
GTCTACGGCC GCGACTTCGT GGCGCCCTAC GCCGCCAGCG GCGTCACCGA CACCCACGAG
GCGGTGGATG CCGACATCGC CGACGACCTG CTGGAAGCCG GCCTCTGGAT CTTTCTGCGC
GGCGGTCCGC CGACCACGCC CTGGCACTCG CTGCCGAAGG CGATCGGCAC GGTGACCGAG
TACGGCGCCG CCTGGAAGCG GGTCTGCGCC TGCACCGACG ACCGCGACGC CGACGACCTC
CTCGCCTTCG GCCTCGACTG GGTGGTGCGC GAGGCGGTCG CCCGCGGCAT CCCGAAGCCT
GCCGCCTGGG CGATGGGCTC GCTGCACGGC GCCACCCGCT ACGGCCTCGA CGGCGAGATC
GGCGGCCTCG GCGGCGGGCG CCGGGCCGAC CTCGTGCTAC TGAACGACGA TCTGGTGCCG
CAGGCGACGT GGTACGGCGG CGAGCTGGTG GTGGAGGACC GCAGACCGAC GCAGCGCCTC
GAACAGGCGC TGGACAAGCC CTACCGCTAT CCGGCGCCGG CCTACGCCAC CGTGCACCTG
CCCGATCCCC TGCCCGCGCT GGTTCCGGCG CTGCCCGCCG GGCCCTGCAC CGTCAACGCG
ATCCGCACCA CGCTGCCGGG CATCGAGCTC ACCCACGAGC GCATCGCCCT GGAGCCCGGC
CCCGACTGGC CGGCGACGCT CGCCGCGCAT GATCTCTGCC ACGTCGCGGT GATCGAGCGG
CACGGCCGTA CCGGCGGCGT CGCCCACGGG CTGCTCTCCG CCTTCGGCCT GAAGCGCGGC
GCGGTGGCGA GCAGCGTCGG CCACGACTCG CACAACGTCA TCGTCGCGGG TCTCAACGAG
AGCGACATGC GCGTGGCGCT CGACGCCATC GCCGCCCATC AGGGCGGGGT CTGCGTCGTG
GAGGACGGGC GGGTCGCCGC GATGGTGCCG CTGCCGGTGG CGGGCCTCCT CTCCGACAAG
CGCGTCGGTG CGGTGGCGGA GGAGGTGAAG GCGTTGAAGG CGGCCTGGGC GCGGGCCGGC
TGCAGCATCC CCTATATGGG CTTCAACCTC ATCCCGCTCT CGGTGATCCC GCAGATCCGC
ATCACCGACA AGGGCTTGGT GCTGGTTCCG GAGATGGCCC AGGTGCCGCT GTTCGAGGCG
GCGTGA
|
|---|
| Protein sequence | MTARPLNRFS VAPLAEMTRR LAEVASGRAA PDRVITGARV LSTYSERILP DREVWIAGGR
IAAVKPAGSH RGAAPRYDAA GGLIAPGLVD PHLHIESSMI TACAYAEAAL VNGTTTIVCD
SHEIGNVLDV NGVEWMLEDA REAPLNIFLT VPSTVPATTP DLETAGGDLT ADKIARLFDA
WPEAIGLGEK MDFVAVASGD ARAHAILRAA LERGRPVSGH VYGRDFVAPY AASGVTDTHE
AVDADIADDL LEAGLWIFLR GGPPTTPWHS LPKAIGTVTE YGAAWKRVCA CTDDRDADDL
LAFGLDWVVR EAVARGIPKP AAWAMGSLHG ATRYGLDGEI GGLGGGRRAD LVLLNDDLVP
QATWYGGELV VEDRRPTQRL EQALDKPYRY PAPAYATVHL PDPLPALVPA LPAGPCTVNA
IRTTLPGIEL THERIALEPG PDWPATLAAH DLCHVAVIER HGRTGGVAHG LLSAFGLKRG
AVASSVGHDS HNVIVAGLNE SDMRVALDAI AAHQGGVCVV EDGRVAAMVP LPVAGLLSDK
RVGAVAEEVK ALKAAWARAG CSIPYMGFNL IPLSVIPQIR ITDKGLVLVP EMAQVPLFEA
A
|
|---|
| |