| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Mpop_3612 |
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| Symbol | |
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| ID | 6311769 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Methylobacterium populi BJ001 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_010725 |
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| Strand | + |
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| Start bp | 3857235 |
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| End bp | 3857975 |
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| Gene Length | 741 bp |
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| Protein Length | 246 aa |
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| Translation table | 11 |
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| GC content | 72% |
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| IMG OID | 642652334 |
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| Product | short-chain dehydrogenase/reductase SDR |
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| Protein accession | YP_001926296 |
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| Protein GI | 188582851 |
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| COG category | [I] Lipid transport and metabolism
[Q] Secondary metabolites biosynthesis, transport and catabolism
[R] General function prediction only |
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| COG ID | [COG1028] Dehydrogenases with different specificities (related to short-chain alcohol dehydrogenases) |
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| TIGRFAM ID | |
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| 
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Plasmid Coverage information |
| Num covering plasmid clones | 4 |
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| Plasmid unclonability p-value | 0.0158219 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | 20 |
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| Fosmid unclonability p-value | 0.051875 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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Sequence |
| Gene sequence | ATGAGTGACC TGGCAGGCAA GCGCGCCCTC GTGACCGGCG CTTCCCGTGG GATCGGCGCC
GCCATCGCGC TGGCGCTGGC GGAGCGCGGC GCGGATGTCG CGATCACCTA CGAGCGCTCG
GCGGAGCGGG CGGCGGAGGT CGTGCGGGCG ATCGAGTCGA AGGGCCGGCG CGGCCTTGCG
ATCCAGGCCG ACAGCGCCGA CGCGGCGGCG GTGAAGCGCT CGGTCGATGC GGCCGCGGCG
GAACTCGGTG GCCTCGACAT CCTCGTGAAC AATGCCGGCA TCGCCCGCGG CGGTCCGGTG
GCGGAGATCA CGCTCGCCGA TATCGACGCG CTGCTGGCCG TGAACGTGCG CTCCGTGGTG
CTGGCCTCGC AGGCGGCGAT CCCGCATCTC GGGAAGGGCG GACGGATCAT CTCCATCGGC
TCGTGCCTCG GCGAGCGGGT GCCGTTTCCC GGCGTCACGG TCTACTCGAT GACGAAGTCG
GCCCTGCTCT CGTTCACCCG CGGACTGGCC CGCGAACTCG GCCCCCAGGG CATCACCGTG
AACCTCGTGC AGCCGGGCTC GACCGATACC GACATGAATC CGTCAGACGG GGCGCAATCG
GACCTGCAGC GCTCCATGAC CGCGCTCGGA CATTACGGCA AGTCGGAGGA CATCGCCGCC
GCCGTGGCCT TCCTGGCGAG CCCGGCCGCG CGGCAGATCA CCGGCACCAC CCTCACGGTC
GACGGCGGCG CGAACGCCTG A
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| Protein sequence | MSDLAGKRAL VTGASRGIGA AIALALAERG ADVAITYERS AERAAEVVRA IESKGRRGLA
IQADSADAAA VKRSVDAAAA ELGGLDILVN NAGIARGGPV AEITLADIDA LLAVNVRSVV
LASQAAIPHL GKGGRIISIG SCLGERVPFP GVTVYSMTKS ALLSFTRGLA RELGPQGITV
NLVQPGSTDT DMNPSDGAQS DLQRSMTALG HYGKSEDIAA AVAFLASPAA RQITGTTLTV
DGGANA
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