Gene Mpop_3600 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagMpop_3600 
Symbol 
ID6311739 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameMethylobacterium populi BJ001 
KingdomBacteria 
Replicon accessionNC_010725 
Strand
Start bp3841050 
End bp3841841 
Gene Length792 bp 
Protein Length263 aa 
Translation table11 
GC content75% 
IMG OID642652322 
ProductABC transporter related 
Protein accessionYP_001926284 
Protein GI188582839 
COG category[P] Inorganic ion transport and metabolism 
COG ID[COG1116] ABC-type nitrate/sulfonate/bicarbonate transport system, ATPase component 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones
Plasmid unclonability p-value0.00199632 
Plasmid hitchhikingNo 
Plasmid clonabilitydecreased coverage 
 

Fosmid Coverage information

Num covering fosmid clones23 
Fosmid unclonability p-value0.177255 
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGTCCGCTG CCACCGCCCT GCGCGTCGAG GATCGGTCCG CGCACCGTCC CGACGCCGGC 
CTCGCCATCG CCCTGCGCGG CCTGACCAAG AGCTTCGACG GGGGCGCCCC CGTCATCCGC
GGCCTCGACC TCACCATCCC CGCCGGCCAG TTCGTCGCCG TGGTCGGCCG CTCGGGCTGC
GGCAAGAGCA CCCTGCTGCG CCTGATCCTC GGCCTCGAAG AGCCCACCGC CGGCCGCGTG
ACGGTCGACG GCGGTGTTGG CAATGGTGCC GGCCAGTCGA AGAAGATCAT GTTCCAGGAG
CCGCGGCTGC TGCCCTGGGC CCGGGTCGCC GACAACGTCG CCGTCGGGCT CGGGCGCGAG
ACGCCCCGCG CCGAGCGGCG CAAGCGGGCG CTCGGCGTGC TCGACGAGGT CGGGCTCGCG
GAGAAGGCCG GCAACTGGCC CGCGACCCTG TCCGGCGGCC AGCGCCAGCG CGTGGCGCTC
GCCCGCGCGC TCGTCAGCCG CCCGGCGCTG CTGGCGCTCG ACGAGCCGCT CGGCGCGCTC
GACGCGCTCA CCCGCATCGA GATGCAGGAG ATGATCGAGC GCATCTGGGA GGCACAGGGC
TTCACCGCGA TCCTCGTCAC CCACGATGTC GGCGAGGCGG TGGCGATGGC CGACCGCATC
CTCGTGGTCG AGCAGGGCAC GATCGCCCTC GACGTCCCGG TCGACGTGCC GCGCCCCCGC
CGCCGCGGCG ACCCGGCGCT CGCCGAACTC GAAGGCCGCA TCCTCGAGCG GCTTCTCGGC
CACCGCGCCT GA
 
Protein sequence
MSAATALRVE DRSAHRPDAG LAIALRGLTK SFDGGAPVIR GLDLTIPAGQ FVAVVGRSGC 
GKSTLLRLIL GLEEPTAGRV TVDGGVGNGA GQSKKIMFQE PRLLPWARVA DNVAVGLGRE
TPRAERRKRA LGVLDEVGLA EKAGNWPATL SGGQRQRVAL ARALVSRPAL LALDEPLGAL
DALTRIEMQE MIERIWEAQG FTAILVTHDV GEAVAMADRI LVVEQGTIAL DVPVDVPRPR
RRGDPALAEL EGRILERLLG HRA