| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Mpop_3581 |
|---|
| Symbol | |
|---|
| ID | 6311674 |
|---|
| Type | CDS |
|---|
| Is gene spliced | No |
|---|
| Is pseudo gene | No |
|---|
| Organism name | Methylobacterium populi BJ001 |
|---|
| Kingdom | Bacteria |
|---|
| Replicon accession | NC_010725 |
|---|
| Strand | + |
|---|
| Start bp | 3821438 |
|---|
| End bp | 3822844 |
|---|
| Gene Length | 1407 bp |
|---|
| Protein Length | 468 aa |
|---|
| Translation table | 11 |
|---|
| GC content | 75% |
|---|
| IMG OID | 642652303 |
|---|
| Product | rare lipoprotein A |
|---|
| Protein accession | YP_001926265 |
|---|
| Protein GI | 188582820 |
|---|
| COG category | [M] Cell wall/membrane/envelope biogenesis |
|---|
| COG ID | [COG0797] Lipoproteins |
|---|
| TIGRFAM ID | [TIGR00413] rare lipoprotein A |
|---|
| 
|
Plasmid Coverage information |
| Num covering plasmid clones | 4 |
|---|
| Plasmid unclonability p-value | 0.0743436 |
|---|
| Plasmid hitchhiking | No |
|---|
| Plasmid clonability | normal |
|---|
| |
Fosmid Coverage information |
| Num covering fosmid clones | 31 |
|---|
| Fosmid unclonability p-value | 1 |
|---|
| Fosmid Hitchhiker | No |
|---|
| Fosmid clonability | normal |
|---|
| |
Sequence |
| Gene sequence | ATGACCCATG TCATGCCACG GGATTTGGCG CGGGGCGGGA AGACCCCGGA GGATCCGGCG
CGCGTCGCGG CGCCGGTCCT GCGGCCGGCC CTGCAGCTCC TGGCGGTCTG CGCGGTGGCG
CTGACCACCG CCAACTGCGC CAACAACCCG GCCAAGTTCG CGGGCGGCGC GTCCTCGGGC
AACGAGGTCG ATCCGAAATA CGGCGTGAAG GCGAGCCGCC GCCTCTACAA CGAGGGCGAC
GTGATCCCGA AGGGCGGCGG CCGGCGCTTC TCGGGCAAGC CCTACGTGGT GGCGGGCAAG
ACCTACGTGC CCCGCGAGGA TGCCCGCGGC TACGTGCGCG AGGGCCTTGC CTCCTGGTAC
GGCAGCGCCT TCCACGGCCG CGTCACGGCC AACGGCGAGA TCTTCGACCG CCATTCCATC
GCCGCGGCCC ATCCCACCCT GCCGCTGCCG AGCTATGTCC GGGTGACCAA CCTCGACAAC
GGCCACTCGA TGATCCTGCG GGTCAACGAC CGCGGGCCCT ACCATGCCGG CCGCCTCATG
GACGTGTCCG AGGAGGCGGC CCGTGCCCTC GAGTTCCACC GCAAGGGTAC GGCACGGGTG
CGGGTCGAGT ATGCCGGCAA GGCCTCGATC GCCGGCAGCG ACGACCGCAA GCTGCTCGCG
ACCCTGCGCA CCGACGGCAG CCCCGCCGTG ATCGGGCGGG CGCCGGTCAT GATGGCCGAT
CTCGGCCCCT CCGAACCCGA TCCCGCCCCG GAGCGTCTCG AACGCGCCTC CCGCGCGCTC
GCCTTCCGCC CGGCGGGTGA GCGCGACGAC GACGCGCCGG AGACCGCGCC CGCCGCGCGT
CCGGCTCGGC CGGCTCCGGT CGTGCTGGCG AGCGCCGCGG TCGCCGTGCC GGCGGCGCTG
CAGCCGACCG CCGCCCGCGC CGCCCCGTTC CGCCCGAACC CGGTGGCGCT CGCCGCCGCT
CCGGCGAAAG CGGCCCCCGC CAAGTCTGGC CTGTCCGAGC CGCGCCGCAT GGTGGCCGAG
GCCGGACGCG CCGCTCAGCC GGCGCACGGC CGGTCCAAGG AGGCTCCCGC CCCGATCACG
CCGTCGCGCC TCGTCGCCGC TCCGGTGAAG GGCGCGTCCG TATCGGTCCG CACGGCCCAA
GCCGTGCCGA TGAAGGCGGC GCCGCTCCAG CACGTCGCCA CCAAGAACCC TGCCAAGTCT
GCCGTGAGGA CAGCGGCGGC CGAACCGGCG CACCGCATGG CGGCGTTGCC CCCGACCTCG
AAACAGGCGA TCGCCAAGCT CGCCGGCGCC GCGCCGGTCG GGACCGCCGC GAAGCCGGGC
GCCAAGGCCG TGACCAAGAC CGCCGCCCAG ACCCCCGCCG CATCCGGCGC CAAGTCGAAG
CGCTCGCAGG TGGCGGCGGC GAACTGA
|
|---|
| Protein sequence | MTHVMPRDLA RGGKTPEDPA RVAAPVLRPA LQLLAVCAVA LTTANCANNP AKFAGGASSG
NEVDPKYGVK ASRRLYNEGD VIPKGGGRRF SGKPYVVAGK TYVPREDARG YVREGLASWY
GSAFHGRVTA NGEIFDRHSI AAAHPTLPLP SYVRVTNLDN GHSMILRVND RGPYHAGRLM
DVSEEAARAL EFHRKGTARV RVEYAGKASI AGSDDRKLLA TLRTDGSPAV IGRAPVMMAD
LGPSEPDPAP ERLERASRAL AFRPAGERDD DAPETAPAAR PARPAPVVLA SAAVAVPAAL
QPTAARAAPF RPNPVALAAA PAKAAPAKSG LSEPRRMVAE AGRAAQPAHG RSKEAPAPIT
PSRLVAAPVK GASVSVRTAQ AVPMKAAPLQ HVATKNPAKS AVRTAAAEPA HRMAALPPTS
KQAIAKLAGA APVGTAAKPG AKAVTKTAAQ TPAASGAKSK RSQVAAAN
|
|---|
| |